Sulfidibacter corallicola: J3U87_27030
Help
Entry
J3U87_27030 CDS
T07864
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor03030
DNA replication
scor03430
Mismatch repair
scor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3U87_27030 (dnaE)
03430 Mismatch repair
J3U87_27030 (dnaE)
03440 Homologous recombination
J3U87_27030 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scor03032
]
J3U87_27030 (dnaE)
03400 DNA repair and recombination proteins [BR:
scor03400
]
J3U87_27030 (dnaE)
Enzymes [BR:
scor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3U87_27030 (dnaE)
DNA replication proteins [BR:
scor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3U87_27030 (dnaE)
DNA repair and recombination proteins [BR:
scor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3U87_27030 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Mitofissin
tRNA_anti_2
Hemerythrin
Motif
Other DBs
NCBI-ProteinID:
QTD49256
UniProt:
A0A8A4TH49
LinkDB
All DBs
Position
complement(8881863..8885327)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSFVHLHVHTEYSLLNASCRIPQLVAKAKELGMTALANTDYGNMFGAIRHYNECRKAGI
KAILGCQVNLTESSRHEKIKRSKADRGGMRESFHLILLAKNQTGYQNLCKLVSTSYTEGF
YYKPRVDWELLEKYHEGLICLSGDLGAYIPQHLKANRYDEAFAYAKRLRDLFGPEHFFIE
LENHFQDEEIQMIPVLAGMAEKLGVGCVAANDVHYLEQPDAEVHDVLLCIQSNAFRDDDS
RWRFPNNEYYFKTPEQMYEIFKGYEKAVENTVKIADMIEFKLMEEYQLPLFDIPENHTLE
TYLEHVSLEGFENRRRTVLEPMKDKGVLRKEWPEYYERIKEEIQVINDMGFPGYFLIVWD
FIRKGKEMGVPVGPGRGSAAGSLVAYSLEITDIDPLQYDLLFERFLNKERVTMPDVDIDF
CQDRRGEVIDYVTEKYGRENVCQIVTYGTMKARMAIKDVGRTLRFSPQETNRIAKLVPED
LGITLPKALDQSPEFHEEYEKDDRIRELIDLSIKVEGLSRNTGVHAAGVIIAPGDVTNWG
PIYKDPKKGTISLQYAKDEAEQIGLLKMDFLGLKTLTVISTALANIKETTGEEVDLNTIT
SFDDPKTYELFCKGETDGVFQFESDGMKNLLIRLGPKRFEDFIALNALYRPGPLGSGMVD
TFIEGAHGAEAHYELPVLEDILEETYGVILYQEQVMRVAQVVGGFTLGGADLLRRAMGKK
KAEVMAQKKLEFLEGASKKGYPEDVCGGLFDKMAEFAKYGFNKSHSAAYALVAYQTAFLK
ANYPVQFMAALLTLDKDNTDKVVNYVEKLRQMGIKMLPPDIRRSRDKFSCEGNNIRFALS
AIKGLGDNALESIMEVKREESIDSLVDFFEKVDLRKVNKKVIEVLVKSGAFDFMELPRRA
MFDAIEDLHGWGQQIQKEAKGGQDNLFGEDVGERCYVKFGEHEWPDKEKLDFEKETLGFY
LSGHPLEAYRKLFKKHATGYTRDLEKTAAGNEVIIGGLVQSVRKITTQKGDMMAFLTLED
FYGVADVVVFPKSYEKFKHLLADEALLVIKGRVDFRNDKPSVQLQEAWELTEWEAKRVRS
CVFQFDASEVDAGLLSRLHQELKGSPGECQVYFEVQVDGKYKTVIKPQSLNVEPGSALSR
FTQENGKIKMLLRY
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttttgttcacctgcacgttcacaccgaatattcgttgttgaacgcctcctgc
cgaatcccgcagttggttgccaaggccaaggagctgggcatgaccgccctggccaacacg
gactacggcaacatgttcggcgccatccgccactacaacgagtgtcggaaggcggggatc
aaggcgatcctcggctgtcaggtgaacctcacggaatcctcgcggcacgaaaagatcaaa
cgctcgaaagcggatcgcggcgggatgcgcgagagcttccacctgatcctgctcgccaag
aaccagacgggctaccagaacctctgcaagctggtgtcgaccagttacacggaaggtttt
tactacaagccgcgcgtggattgggaactcttggaaaagtaccacgagggcttgatctgc
ctttcgggcgacctgggtgcctacatcccccagcacctgaaagccaaccgctacgacgag
gccttcgcctacgccaagcgcctgcgcgatctgttcgggccggagcatttcttcatcgag
ctggaaaatcattttcaggacgaggaaatccagatgattccggtcctggccgggatggcg
gaaaagctgggcgtgggatgtgtcgcggccaacgacgtgcactatctggaacaacccgat
gccgaggtgcacgacgttctgttgtgtattcagtccaacgcgttccgcgacgacgacagc
cggtggcgcttccccaacaacgaatactatttcaagaccccggagcagatgtacgagatc
ttcaaggggtacgaaaaagcggtcgagaacacggtcaaaatcgccgacatgatcgagttc
aagttgatggaggaataccagctcccgcttttcgacattcccgaaaaccacacgctggaa
acctacctggagcacgtcagcctggaaggcttcgagaaccgccgccgcaccgtgctggaa
ccaatgaaggacaagggcgtgctgcgcaaggagtggccggaatactacgagcgcatcaag
gaagaaatccaggtcatcaacgacatgggatttcccggctacttcttgatcgtctgggac
ttcatccgcaaaggcaaggaaatgggcgtgccggtgggtccgggccgcggttcggcggcc
ggctccctggtcgcctactcgctggaaatcaccgatatcgaccccttgcagtacgatctc
ctgttcgaacgcttcctcaacaaagagcgggtcaccatgccggatgtcgatatcgacttc
tgccaggaccggcgtggcgaagtcatcgactacgtgacggagaagtacgggcgtgaaaac
gtctgtcagatcgtcacttacggtaccatgaaggcccgcatggccatcaaggacgtgggg
cgtacgctgcggttctcgccgcaggaaacgaaccgaatcgccaagctggtaccggaagac
ctgggcatcaccctacccaaggcgttggaccaaagcccggaatttcacgaggaatacgag
aaggacgaccggatccgggaactgatcgacctgagtatcaaggtggagggcctcagccgc
aacacgggggtgcacgcggccggggtcatcatcgcccctggcgacgtgaccaactggggc
ccgatctacaaggatccgaagaagggcaccatcagccttcagtacgccaaggacgaggcc
gagcagatcggcctgctgaagatggacttcctgggcctgaagaccctgacggtgatttcc
accgcgctggccaacatcaaggagaccaccggtgaagaggtggacctgaacacgatcacc
agcttcgacgatcccaaaacctacgagctgttttgcaaaggcgaaacggacggggtgttc
cagtttgaatccgacggaatgaaaaacctgctgatccgcctgggacccaaacgcttcgag
gatttcatcgccctcaacgcgctctaccggccaggtccgctgggatcgggcatggtcgac
accttcatcgagggtgcccacggagccgaagcccattacgagctccccgtcctggaagac
atcctcgaagagacctacggcgttatcctgtaccaggagcaggtcatgcgggtcgcccag
gtcgtgggcggcttcaccctgggcggcgcggacctgttgcgccgcgccatgggtaagaag
aaggccgaggtcatggcccaaaagaagttggagttcctggagggcgccagtaaaaagggg
tacccggaggacgtgtgcggtggcctgttcgacaagatggccgagttcgccaagtacggc
ttcaacaaatcgcactcggcggcctacgccctggtggcctatcaaacggccttcctgaaa
gccaactatccggtccagttcatggccgccttgctgacgctcgataaagacaacacggac
aaggtagtcaactacgtggaaaagttgcggcagatgggcatcaaaatgctgccgccggac
attcgtcgctcgcgcgacaagttcagttgcgagggaaacaacatccgctttgcgttgagt
gcgatcaagggcctgggcgacaacgcgctcgagtcgatcatggaggtcaagcgggaggag
agcatcgactcgctggtggacttcttcgaaaaagtggacctgcgcaaggtcaacaaaaag
gtgatcgaagttttggtgaaatccggcgcgttcgacttcatggagctgccgcggcgggcc
atgttcgacgccatcgaggatttgcacggctggggccaacagatccagaaggaagccaag
ggcggccaggacaacttgttcggtgaagacgtaggggagcggtgttacgtcaaattcggc
gagcacgagtggccggacaaggaaaagttggacttcgagaaggagaccctggggttctac
ctctcgggccacccgctggaggcctaccgaaagctgttcaagaaacacgcgaccgggtac
acgcgggacctggaaaagacggcggcgggcaacgaggtcatcatcggcggcctggtgcag
tcggtccgcaagatcacgactcaaaagggcgacatgatggccttcctgacgctggaagat
ttctatggcgtggcggacgtggtcgtgttccccaagagctatgaaaagttcaagcacctg
ctggcggacgaggcgctgctggtgatcaagggccgggtggacttccgcaacgacaaaccg
agcgtgcagttgcaggaggcctgggagctgaccgagtgggaggccaaacgggtacgatcc
tgcgtgttccaattcgacgccagcgaggtggacgcgggcctgttgtcgcgactgcaccag
gagctgaagggcagtcctggcgagtgccaggtctatttcgaagtgcaggtggacggcaag
tacaagaccgtgatcaaaccccagtcgttgaacgtggagccgggcagtgccctgtcgcgg
ttcacccaggaaaacggaaaaataaagatgctgttgcgctactga
DBGET
integrated database retrieval system
