Sulfidibacter corallicola: J3U87_33480
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Entry
J3U87_33480 CDS
T07864
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scor
Sulfidibacter corallicola
Pathway
scor00010
Glycolysis / Gluconeogenesis
scor00020
Citrate cycle (TCA cycle)
scor00260
Glycine, serine and threonine metabolism
scor00280
Valine, leucine and isoleucine degradation
scor00310
Lysine degradation
scor00380
Tryptophan metabolism
scor00620
Pyruvate metabolism
scor00630
Glyoxylate and dicarboxylate metabolism
scor00640
Propanoate metabolism
scor00670
One carbon pool by folate
scor00785
Lipoic acid metabolism
scor01100
Metabolic pathways
scor01110
Biosynthesis of secondary metabolites
scor01120
Microbial metabolism in diverse environments
scor01200
Carbon metabolism
scor01210
2-Oxocarboxylic acid metabolism
scor01240
Biosynthesis of cofactors
Module
scor_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scor_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scor_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
scor_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
J3U87_33480 (lpdA)
00020 Citrate cycle (TCA cycle)
J3U87_33480 (lpdA)
00620 Pyruvate metabolism
J3U87_33480 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
J3U87_33480 (lpdA)
00640 Propanoate metabolism
J3U87_33480 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J3U87_33480 (lpdA)
00280 Valine, leucine and isoleucine degradation
J3U87_33480 (lpdA)
00310 Lysine degradation
J3U87_33480 (lpdA)
00380 Tryptophan metabolism
J3U87_33480 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
J3U87_33480 (lpdA)
00670 One carbon pool by folate
J3U87_33480 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scor04147
]
J3U87_33480 (lpdA)
Enzymes [BR:
scor01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
J3U87_33480 (lpdA)
Exosome [BR:
scor04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
J3U87_33480 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Biotin_lipoyl_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
GIDA
AlaDh_PNT_C
Thi4
GCV_H
DUF2118
RnfC_N
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QTD50523
UniProt:
A0A8A4TLS7
LinkDB
All DBs
Position
complement(11333004..11334794)
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AA seq
596 aa
AA seq
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MSDKIEVRVPELGDFKDVDVVEILVAVGDRVAEGDSLIALETDKASMEVPAPTDGTLVSL
SVEAGGTVNEGDVIAIMEAGAATDAGAKPQVAESAPAPKPAPAEPAPALGRNETAQAEPI
AAPEGTFDCDLLVLGSGPGGYTAAFRGADLGLKTVLVERDASLGGVCLNVGCIPSKALLH
SAKVIDEAAHMSRHGIVFGKPEIQLDKLRAWKDGVVGKLTGGIRQLAKSRKVDVVHGTGS
FVGPHEMQVSHEGDVRTISFRYAVIAAGSRPVQIPGFPYDDPRLMDSTGALELADIPERL
LVIGGGIIGLEMATVYEALGTKVTVVELLDRLMMGADRDMVRPFQKRMAARFENIYLESK
VTAIEAEEAGLRVRFEGEKAPSEDLFDRVLLSVGRAPNGKLIGAAHAGVAVDERGFIAVD
NQQRTNVPHIFAIGDIVGQPMLAHKATHEGKVAAEVAAGHKSFFDARVIPSVAYTDPEVA
WVGVTEEQAKAQGLNYGKGTFPWAASGRSLALGRDEGVTKLLFDKDTGRVIGAAAVGTNA
GEIIAEAGLAIEMGCDAEDIGLTVHAHPTLSETVAFAAEAFEGTITDLYIPRKKKK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagatcgaagtgcgcgtgcccgagctgggcgatttcaaagacgtggatgtg
gtcgaaatcttggtggccgtgggtgatcgcgtcgccgagggcgattcgctgatcgcgctg
gaaaccgacaaggcgtcgatggaagtaccggccccgaccgacgggaccctggtctccttg
tccgtggaagccggcggcacggtgaacgagggcgatgtcatcgcgatcatggaggccggc
gccgcgaccgacgcgggcgccaaaccccaggtcgccgagtcggccccggccccgaaacct
gctcccgccgagcctgctccggcacttggccggaacgagacggcccaagccgagccgatc
gcggcgccggagggaaccttcgactgcgatctcctggtcctgggttccgggccgggcggc
tataccgccgcgtttcgcggtgccgacctgggcctgaaaacggtgttggtcgagcgcgac
gcgagcctcggcggcgtttgcctgaacgtgggttgcatcccgtccaaggccttgctgcac
agcgccaaggtcatcgacgaggccgcccacatgagccggcacggcatcgtgttcggcaag
cccgaaatccaattggacaagttgcgcgcctggaaggacggcgtcgtcggcaaactcacc
ggcggcattcgccagttggccaagagccgcaaggtggacgtggtgcacgggaccgggtcc
ttcgtgggcccccacgagatgcaggtcagccacgaaggcgacgtgcgcacgatcagcttc
cgctacgccgtgatcgcggccggttcgcgaccggtacaaatccccggcttcccctacgac
gatccgcgcttgatggattccaccggggcgctggaattggccgacattcccgagcggttg
ctggtcatcggcggcggcatcatcggtttggagatggccaccgtctacgaggcgttgggg
accaaggtcaccgtggtcgaattgctcgaccggttgatgatgggcgccgaccgcgacatg
gtgcggcccttccagaagcgaatggcggcgcggttcgagaacatctacctcgagtccaag
gtgacggcgatcgaagccgaggaagcgggtcttcgcgtccgcttcgaaggggagaaggcg
ccctcggaggacttgttcgaccgcgtcctgctgtcggtgggccgcgcgcccaacggcaag
ctgatcggtgcggcgcacgccggcgtggccgtggacgagcgcggcttcatcgccgtcgac
aaccagcagcgcacgaacgtgccgcacatcttcgcgatcggggatatcgtcgggcagccg
atgctggcccacaaggcgacccacgagggcaaggtggccgcggaagtcgccgcgggccac
aagagcttcttcgacgcccgggtgatcccgagcgtggcctacaccgatccggaagtggcc
tgggtcggcgtgaccgaggaacaggccaaggcgcagggcctcaattacggcaagggcacc
ttcccgtgggcggccagcggtcgatcgttggccctgggccgcgacgagggcgtcaccaag
ctcctgttcgacaaggacacgggccgcgtgatcggtgcggccgcggtgggcaccaacgcc
ggcgagatcatcgccgaggcgggcctggccatcgagatgggttgcgatgccgaggatatc
ggcctcacggtgcacgcgcacccgaccttgagcgagacggtcgccttcgccgccgaagcg
ttcgagggcaccatcacggacctgtacattccccgcaaaaagaaaaagtga
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