KEGG   Sulfidibacter corallicola: J3U87_33480
Entry
J3U87_33480       CDS       T07864                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
scor  Sulfidibacter corallicola
Pathway
scor00010  Glycolysis / Gluconeogenesis
scor00020  Citrate cycle (TCA cycle)
scor00260  Glycine, serine and threonine metabolism
scor00280  Valine, leucine and isoleucine degradation
scor00310  Lysine degradation
scor00380  Tryptophan metabolism
scor00620  Pyruvate metabolism
scor00630  Glyoxylate and dicarboxylate metabolism
scor00640  Propanoate metabolism
scor00670  One carbon pool by folate
scor00785  Lipoic acid metabolism
scor01100  Metabolic pathways
scor01110  Biosynthesis of secondary metabolites
scor01120  Microbial metabolism in diverse environments
scor01200  Carbon metabolism
scor01210  2-Oxocarboxylic acid metabolism
scor01240  Biosynthesis of cofactors
Module
scor_M00009  Citrate cycle (TCA cycle, Krebs cycle)
scor_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scor_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
scor_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:scor00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    J3U87_33480 (lpdA)
   00020 Citrate cycle (TCA cycle)
    J3U87_33480 (lpdA)
   00620 Pyruvate metabolism
    J3U87_33480 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    J3U87_33480 (lpdA)
   00640 Propanoate metabolism
    J3U87_33480 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    J3U87_33480 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    J3U87_33480 (lpdA)
   00310 Lysine degradation
    J3U87_33480 (lpdA)
   00380 Tryptophan metabolism
    J3U87_33480 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    J3U87_33480 (lpdA)
   00670 One carbon pool by folate
    J3U87_33480 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scor04147]
    J3U87_33480 (lpdA)
Enzymes [BR:scor01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     J3U87_33480 (lpdA)
Exosome [BR:scor04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   J3U87_33480 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Biotin_lipoyl_2 FAD_oxidored Pyr_redox_3 FAD_binding_2 NAD_binding_8 GIDA AlaDh_PNT_C Thi4 GCV_H DUF2118 RnfC_N FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: QTD50523
UniProt: A0A8A4TLS7
LinkDB
Position
complement(11333004..11334794)
AA seq 596 aa
MSDKIEVRVPELGDFKDVDVVEILVAVGDRVAEGDSLIALETDKASMEVPAPTDGTLVSL
SVEAGGTVNEGDVIAIMEAGAATDAGAKPQVAESAPAPKPAPAEPAPALGRNETAQAEPI
AAPEGTFDCDLLVLGSGPGGYTAAFRGADLGLKTVLVERDASLGGVCLNVGCIPSKALLH
SAKVIDEAAHMSRHGIVFGKPEIQLDKLRAWKDGVVGKLTGGIRQLAKSRKVDVVHGTGS
FVGPHEMQVSHEGDVRTISFRYAVIAAGSRPVQIPGFPYDDPRLMDSTGALELADIPERL
LVIGGGIIGLEMATVYEALGTKVTVVELLDRLMMGADRDMVRPFQKRMAARFENIYLESK
VTAIEAEEAGLRVRFEGEKAPSEDLFDRVLLSVGRAPNGKLIGAAHAGVAVDERGFIAVD
NQQRTNVPHIFAIGDIVGQPMLAHKATHEGKVAAEVAAGHKSFFDARVIPSVAYTDPEVA
WVGVTEEQAKAQGLNYGKGTFPWAASGRSLALGRDEGVTKLLFDKDTGRVIGAAAVGTNA
GEIIAEAGLAIEMGCDAEDIGLTVHAHPTLSETVAFAAEAFEGTITDLYIPRKKKK
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagtgacaagatcgaagtgcgcgtgcccgagctgggcgatttcaaagacgtggatgtg
gtcgaaatcttggtggccgtgggtgatcgcgtcgccgagggcgattcgctgatcgcgctg
gaaaccgacaaggcgtcgatggaagtaccggccccgaccgacgggaccctggtctccttg
tccgtggaagccggcggcacggtgaacgagggcgatgtcatcgcgatcatggaggccggc
gccgcgaccgacgcgggcgccaaaccccaggtcgccgagtcggccccggccccgaaacct
gctcccgccgagcctgctccggcacttggccggaacgagacggcccaagccgagccgatc
gcggcgccggagggaaccttcgactgcgatctcctggtcctgggttccgggccgggcggc
tataccgccgcgtttcgcggtgccgacctgggcctgaaaacggtgttggtcgagcgcgac
gcgagcctcggcggcgtttgcctgaacgtgggttgcatcccgtccaaggccttgctgcac
agcgccaaggtcatcgacgaggccgcccacatgagccggcacggcatcgtgttcggcaag
cccgaaatccaattggacaagttgcgcgcctggaaggacggcgtcgtcggcaaactcacc
ggcggcattcgccagttggccaagagccgcaaggtggacgtggtgcacgggaccgggtcc
ttcgtgggcccccacgagatgcaggtcagccacgaaggcgacgtgcgcacgatcagcttc
cgctacgccgtgatcgcggccggttcgcgaccggtacaaatccccggcttcccctacgac
gatccgcgcttgatggattccaccggggcgctggaattggccgacattcccgagcggttg
ctggtcatcggcggcggcatcatcggtttggagatggccaccgtctacgaggcgttgggg
accaaggtcaccgtggtcgaattgctcgaccggttgatgatgggcgccgaccgcgacatg
gtgcggcccttccagaagcgaatggcggcgcggttcgagaacatctacctcgagtccaag
gtgacggcgatcgaagccgaggaagcgggtcttcgcgtccgcttcgaaggggagaaggcg
ccctcggaggacttgttcgaccgcgtcctgctgtcggtgggccgcgcgcccaacggcaag
ctgatcggtgcggcgcacgccggcgtggccgtggacgagcgcggcttcatcgccgtcgac
aaccagcagcgcacgaacgtgccgcacatcttcgcgatcggggatatcgtcgggcagccg
atgctggcccacaaggcgacccacgagggcaaggtggccgcggaagtcgccgcgggccac
aagagcttcttcgacgcccgggtgatcccgagcgtggcctacaccgatccggaagtggcc
tgggtcggcgtgaccgaggaacaggccaaggcgcagggcctcaattacggcaagggcacc
ttcccgtgggcggccagcggtcgatcgttggccctgggccgcgacgagggcgtcaccaag
ctcctgttcgacaaggacacgggccgcgtgatcggtgcggccgcggtgggcaccaacgcc
ggcgagatcatcgccgaggcgggcctggccatcgagatgggttgcgatgccgaggatatc
ggcctcacggtgcacgcgcacccgaccttgagcgagacggtcgccttcgccgccgaagcg
ttcgagggcaccatcacggacctgtacattccccgcaaaaagaaaaagtga

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