Streptococcus constellatus subsp. pharyngis C818: SCR2_1048
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Entry
SCR2_1048 CDS
T02834
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
scos
Streptococcus constellatus subsp. pharyngis C818
Pathway
scos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCR2_1048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scos03019
]
SCR2_1048
Messenger RNA biogenesis [BR:
scos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCR2_1048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AGU74637
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Position
complement(1064975..1066636)
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AA seq
553 aa
AA seq
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MSNIKLIALGGVRENGKNLYIAEVDESIFILDVGLKYPENEQLGVDFVIPNMDYLFENKD
RISGVFLTHGHADAIGALPYLLAETKVPVFGSELTIELAKLFVKGNDTVKKFNDFHVIDE
DTEIDFGGTIVSFFKTTHSIPESLGIVLKTSEGNIVYTGDFKFDQTASQSYATDFARLAE
IGREGVLALLSDSANADSSIQVASESEVGKEITDTIGDWNGRVIVAAVASNLSRIQQVFE
AAAKTGRRVVLTGFDIENIVRTAIRLKKLSLVDERLLIKPKEMSKFEDHELIILETGRMG
EPINGLRKMSIGRHRYVEIKEGDLIYIVTTPSIAKEALVARVENMIYQAGGVVKLITQDL
RVSGHGNERDLQLMLNLLQPKFLFPIQGEYRELAAHAKAAMAVGMLPENIFIPKRGSIME
YEKGDFLLAGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNRRDKKIISK
AKVHTRGFVYVKKSRDILRESADLINNTVEDYLAKDNFDWGELKGAVRDSLAKYLFEQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattaaattgattgctttgggcggtgtacgtgaaaatggaaaaaatctttac
atcgctgaagtggatgaatctatttttatccttgatgtcggactaaagtatccggaaaat
gaacagcttggtgtggactttgtcattccaaatatggactatttatttgaaaataaggac
cgcatttcaggggtctttttgacacacggacatgcagatgcgattggtgccctgccttat
ttgttggcggaaacaaaggtacctgtgtttggatcggaattaacgattgaactggctaag
ctatttgtcaaaggaaatgatacggttaaaaaattcaatgattttcatgtgattgatgaa
gatacagagattgactttggaggtaccattgtatctttctttaaaacaacgcactccatt
ccagagagtctagggattgtcttaaaaacgtctgaaggaaatattgtttatacgggtgat
tttaagtttgaccaaacggctagtcagtcttatgcaacagattttgcgcgtttagcagaa
attggtcgagaaggcgttctagctcttcttagtgattctgcaaatgcagatagtagtatt
caagtggcaagtgaaagtgaagtcggcaaagaaatcaccgatacgattggtgattggaat
ggacgcgtcatagttgcagcagttgcaagtaatctctcgcgtattcaacaggtttttgaa
gccgctgctaagacaggtcgtcgtgttgtgctgactgggtttgacattgaaaatatcgtt
cggacggctattcgcttgaagaaattatcgcttgtagatgagcgtttgctgattaaacct
aaagaaatgtctaaatttgaagatcatgaattgatcattttggaaactggtcgaatgggt
gagcctatcaatggcttgcgcaaaatgtctattggtcgtcaccgctatgtagaaatcaaa
gaaggtgatttgatttacattgttacaacaccgtctatcgcaaaagaggccttggtagcg
cgcgtagaaaatatgatttatcaagctggtggtgttgttaaattgattacgcaagatttg
cgggtgtctggtcatggaaatgagcgcgatttgcaactgatgttaaatctcttgcaacca
aaattcttgttcccaattcaaggagaatatcgtgaattagcagcgcatgctaaagctgca
atggctgttggaatgttgccagaaaacatttttattccaaaacgcggtagcattatggaa
tatgaaaaaggagatttcttgcttgctggtgcagtccctgctggcgatgtcatgattgac
ggaaatgcgattggtgatgtagggaatatcgttcttcgtgaccgcaaagttctgtctgaa
gatggtatctttatcgtagctattacagtgaaccgtcgtgacaagaagattatttcaaaa
gcaaaagttcacacgcgtggatttgtttatgtcaagaaaagtcgtgatattttacgtgag
agtgctgatttaatcaataatacagttgaagattaccttgcgaaagataattttgactgg
ggtgaattgaagggagctgtacgtgacagtcttgcgaaatacctctttgagcaaaccaaa
cgtcgtccagccattttacccgttgtaatggaagtacgttaa
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