Streptococcus constellatus subsp. pharyngis C818: SCR2_1376
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Entry
SCR2_1376 CDS
T02834
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
scos
Streptococcus constellatus subsp. pharyngis C818
Pathway
scos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCR2_1376 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scos03019
]
SCR2_1376 (deaD)
03009 Ribosome biogenesis [BR:
scos03009
]
SCR2_1376 (deaD)
Enzymes [BR:
scos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCR2_1376 (deaD)
Messenger RNA biogenesis [BR:
scos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCR2_1376 (deaD)
Ribosome biogenesis [BR:
scos03009
]
Prokaryotic type
rRNA helicases
SCR2_1376 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGU74951
LinkDB
All DBs
Position
complement(1414941..1416485)
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AA seq
514 aa
AA seq
DB search
MKFNELHLSAELLAEIDKAGFVEASPIQEQTIPLAMAGKDVIGQAQTGTGKTAAFGFPTL
EKIDTEDPTVQALIIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPEDRQTLLF
SATMPDAIKQIGVKFMKEPEHVKIAAKELTTELVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQGKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIESLTKK
RMKGMKPATAEEAFQAKKKVALKKIERDFADETIRSNFEKFGKDARKLAAEFTPEELALY
ILSLTVQDPDTLPEVEIAREKPLPFKYVSGANKGNRNNKGGNRRERGSRRGNYKKGGRNE
YFDKEKRYRKEHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaatgaattacatttgtctgctgaattgttagcagaaattgacaaagctggt
tttgtagaagctagcccgattcaagaacagaccattccgctggctatggcaggaaaagac
gtcattggacaagcccagactggtactggaaaaacagctgcgtttggttttccgactctg
gaaaagattgatacagaggatccaactgttcaggcactgattattgcaccgactcgtgaa
ttagcagtacagagtcaagaagaactctttagatttggtcgtagtaagggtgtcaaagtc
cgctcagtttatggcgggtctagtattgaaaagcaaattaaagctttgaaatcaggtgct
cacattgtcgtaggaaccccagggcgtttattagacctcattaagcgtaaggcgttgaaa
ctcaatcatgtagaaacgcttattttagatgaagcagacgaaatgctcaatatgggtttc
ttagaagacattgaagccattatttcccgtgtgccagaagaccgtcagacccttctcttt
tcagcaaccatgccggatgctatcaagcagattggtgtgaagtttatgaaagagcctgag
catgtcaagattgctgctaaagagctgactactgagctggtagaccagtactatatccgc
gtcaaggaaaatgaaaaatttgataccatgacacgtcttatggatgtagagcagccagaa
ctttctattgtttttgggcgtaccaaacgccgagtagatgaattgactcgtggtctcaag
attcgtggtttccgagcagaagggattcatggcgatttagaccaaggaaaacgcctccgt
gtacttcgtgatttcaagaatggcaatctagacgttcttgttgcaacagatgtagctgca
cgtggattggatatttctggtgtgacccatgtctacaactacgacattcctcaggatcca
gaaagctatgttcaccggattggtcggactggtcgtgctggtaagtcaggtcagtctatc
actttcgtagctccaaatgaaatgggttatcttcaaattatcgaaagcttaactaagaaa
cgcatgaaaggcatgaagccagcaactgcagaagaagcctttcaagctaagaaaaaagtt
gccctcaaaaagattgagcgagattttgcagatgagaccattcgtagcaattttgagaaa
tttggtaaagatgctcgtaagctagcagctgaatttacgccagaagagttagccttatat
atcttgagcctaacggtgcaagatccagatactcttccagaagtggaaattgcgcgtgag
aaaccactaccgtttaaatatgtttctggtgccaataaggggaatcggaataataaaggt
ggaaatcgtcgtgaacgtggtagcagacgtggcaattacaaaaagggcggtcgcaatgag
tattttgacaaagaaaaacgctatcgcaaagagcacaagaaaccacgcaatacttcaagt
gagaagaaaacaggttttgtgattcggaataaaggtgataaataa
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