Salinivibrio costicola: HBA18_00080
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Entry
HBA18_00080 CDS
T06511
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
scot
Salinivibrio costicola
Pathway
scot00071
Fatty acid degradation
scot00280
Valine, leucine and isoleucine degradation
scot00310
Lysine degradation
scot00362
Benzoate degradation
scot00380
Tryptophan metabolism
scot00410
beta-Alanine metabolism
scot00640
Propanoate metabolism
scot00650
Butanoate metabolism
scot00907
Pinene, camphor and geraniol degradation
scot00930
Caprolactam degradation
scot01100
Metabolic pathways
scot01110
Biosynthesis of secondary metabolites
scot01120
Microbial metabolism in diverse environments
scot01200
Carbon metabolism
scot01212
Fatty acid metabolism
Module
scot_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HBA18_00080 (fadB)
00650 Butanoate metabolism
HBA18_00080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HBA18_00080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HBA18_00080 (fadB)
00310 Lysine degradation
HBA18_00080 (fadB)
00380 Tryptophan metabolism
HBA18_00080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HBA18_00080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HBA18_00080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HBA18_00080 (fadB)
00930 Caprolactam degradation
HBA18_00080 (fadB)
Enzymes [BR:
scot01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HBA18_00080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HBA18_00080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HBA18_00080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HBA18_00080 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QIR04915
LinkDB
All DBs
Position
1:complement(16820..18997)
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGDNLSVRALDNGIAELTLDSQGSVNKLDLATLESLNEALEALAGQDIKGLLLTSAK
SAFIVGADITEFLGLFAKPDQELSDWVARANAIFNRLEDLPFPTISAINGHALGGGCECV
LATDLRVASTDARIGLPETKLGIMPGFGGTVRLPRLVGADTAMELITAGKDKRASAALKE
GLVDAVVESDKLRDAAIAMLTQAIEGKIDWQTRRHQKQQPLALNRTEAAMSFTMAKGMVA
QVAGKHYPAPMAAVKAIEEAASLGRDEALEVENRYFVKLAKTDVAKALVGIFLNDQVIKG
NAKKAAKQGKDTQRGAVLGAGIMGGGIAYQSALKGVPVMMKDIAPQSLELGMTEATKLLN
KQLSRGRIDGFKMGQVLSSITPSLHYAGIEHSDVVVEAVVENPKIKASVLKEVEALVSDD
TVIASNTSTIPINTLAKSLARPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIARVVAYA
AKMGKSPVVVNDCPGFFVNRVLFPYFHAFSLLLRDGVDFQRIDKIMEKQFGWPMGPAYLL
DVVGIDTAHHAQAVMAEGFPDRMSKSGRDAIDVMFEAERFGQKNGKGFYRYTTDKKGKPK
KEADEAVPALLAPVIEGGQAEISDEDIIARMMVPMINEVARCLEENIIASPAEADIALVY
GIGFPPFRGGAFRYVDTLGVENYVAMAEKLADLGALYHVPADMKRRAGDKQAYFDVTPVN
APQSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaggagataacctttcagttcgtgcattggataacggcattgcagaactg
acgctggacagccaaggttctgtcaacaaactggatcttgcaacgctagaaagcttaaac
gaagcgctggaagcgcttgcgggccaagacattaaaggcttactactcacctcagccaaa
tcagcctttattgtaggcgcggatatcacagaatttctcggcttgtttgccaagccagat
caggaactgtctgactgggtggcacgtgctaacgctatttttaaccgcttggaagaccta
cctttcccaacgatcagtgccattaatggccatgctcttggcggtggttgtgagtgcgta
ctcgccactgacttacgcgtggcgagtactgacgcccgtatcggtctacccgaaaccaaa
ctcggtattatgccgggctttggagggaccgttcgtttgccacgtcttgtcggcgcagat
accgcaatggagctgattaccgcaggaaaagacaagcgcgccagtgctgcgttgaaagag
ggactggtcgacgcggtggtagagagcgacaaactgcgtgatgccgcaatagccatgctt
actcaagccattgaaggcaagattgattggcaaacccgccgccatcaaaaacaacaacct
ctagcccttaatcgcaccgaagcggcgatgagctttaccatggccaaaggcatggtcgct
caggttgctggtaagcattaccccgctccgatggcggccgttaaggcgattgaagaagcc
gcaagccttggacgtgatgaggcgcttgaggttgagaaccgttactttgttaaattggcc
aagactgacgttgccaaagcccttgtggggatttttctcaatgaccaagtcattaagggc
aatgcgaagaaagcagccaaacaaggcaaagatacgcagcgtggagctgtgctcggcgca
ggcatcatgggcggcggtatcgcgtatcaatccgcgctgaaaggcgtgccggtaatgatg
aaagacatcgcgcctcagtcattggagctgggcatgacggaagcgaccaagttgttgaat
aagcaacttagccgcggtcgcattgatggctttaaaatgggccaagtgctgtcgtcaatc
actccaagcctccactatgctggcattgagcacagcgatgtcgtggtcgaggctgtggtc
gagaacccgaaaatcaaagcgagcgtactcaaagaagtggaagcgctagtcagtgacgat
acggtgattgcctctaatacttccaccattccaattaacaccctcgccaagtctttggcc
cgcccagaaaacttctgtggcatgcacttctttaacccggttcatcgcatgccattagtg
gaagtgattcgtggcgagaaaacctctgatgaaaccatcgcgcgcgtggtggcttatgcc
gccaagatgggtaaatcgcccgtggtcgtcaacgactgccctggctttttcgtcaaccgc
gtattgttcccctacttccatgcctttagcttgctactgcgtgacggcgtggacttccag
cgcattgacaaaatcatggaaaaacaatttggctggcctatgggccctgcttatctgctt
gatgtggttggtatcgataccgcacatcatgctcaggcagtgatggcagaaggcttccca
gaccgcatgagtaaatctggccgtgatgccattgatgtgatgtttgaggccgagcgcttt
ggtcagaaaaatggcaaaggcttctatcgctacaccacagacaagaaaggcaagccgaaa
aaagaagccgatgaagccgtccctgcgttgctcgcccccgtgattgaaggtggtcaagca
gagatcagtgacgaggatattatcgctcgtatgatggtgccgatgatcaacgaagtcgcc
cgctgcttggaagaaaacatcattgcctctccggcagaagcagacattgctttggtttac
ggtatcggcttccctccattccgaggcggtgctttccgctacgtggataccttgggtgtc
gaaaactatgtcgccatggcagaaaagttggcggatctcggtgccttgtatcacgtcccc
gctgatatgaaacgtcgagctggcgacaaacaggcttattttgatgttacaccggtcaac
gcaccgcaatcagcctaa
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