Salinivibrio costicola: HBA18_00285
Help
Entry
HBA18_00285 CDS
T06511
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
scot
Salinivibrio costicola
Pathway
scot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA18_00285 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scot03019
]
HBA18_00285 (rhlB)
Enzymes [BR:
scot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HBA18_00285 (rhlB)
Messenger RNA biogenesis [BR:
scot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HBA18_00285 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QIR04947
LinkDB
All DBs
Position
1:complement(59515..60807)
Genome browser
AA seq
430 aa
AA seq
DB search
MKMTHITEQKFAELGLHADVLKSLEAKGFTQCTPIQAKALPVLLTGQDIAGQAQTGTGKT
LAFLAATFHHLLTTDAPASRKTNQPRAIILAPTRELAIQIYNDAEPLLAHTSITAGLAYG
GEGYDKQQQTLEQGVDILIGTCGRIIDFYKKKVIDLHGIQAVVLDEADRMFDLGFIKDIR
FLFNRMPAANKRLNMLFSATLSYRVQELAFEHMTNPEHVVIEPEQKTGHRIKEELFQPSN
NEKMPLLQTLIEEDWPERAIIFANTKHRCESIWAHLAADDHRVGLLTGDVPQKKRVKILE
QFTKGEIDLLVATDVAARGLHIPQVTHVFNYDLPDDAEDYVHRIGRTGRAGASGSSISFA
CEEYAINLPAIEEYIEHSIPVSEFDRSALLTDLPAPKKIAKRQVNSRRNTGKNNSGNNRN
RQRRRPQKSA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacgcatatcacagagcagaaatttgccgagctcggcttgcacgccgatgtt
ctcaagagcttggaggccaaagggttcacccaatgtacgcctatccaagcaaaggcattg
ccggtcctgctcaccggccaagacattgcaggacaggcgcaaacggggacaggcaaaacc
ctagcgtttctggctgcgacgtttcatcacttgttaaccactgacgcaccagcgtcacgg
aaaactaaccaaccacgggcaatcatattagctcctacgcgcgaattggccattcagatc
tataacgatgcggaaccattacttgcgcatacttcgatcaccgcagggcttgcctatggt
ggcgaaggttatgacaaacagcaacaaacacttgagcaaggcgttgatattttaatcggc
acctgcggccgtatcatcgacttctacaagaagaaagtgattgatttacatggcattcag
gcagtggtgttggatgaagcggatcgcatgttcgatttaggctttatcaaagacattcgc
ttcttgtttaaccgtatgcctgcggctaacaagcgcttgaacatgttgttttctgccacc
ttgtcttatcgcgttcaagaactggccttcgagcacatgaccaatcctgagcatgtggtg
atcgagccagaacaaaaaaccggccatcgcattaaagaagagcttttccagccttctaac
aacgaaaaaatgcccttgctgcaaaccttgatcgaagaagactggccggagcgcgcgatc
atttttgctaacaccaagcatcgctgcgagtcaatttgggcccaccttgcggcagacgat
catcgcgttggtctactgactggtgacgttccgcagaaaaagcgggtgaaaatcctcgag
caattcaccaaaggtgagattgatttgttggtggccaccgatgtcgctgcgcgcggcttg
catattccgcaagtcacccacgtgtttaactacgacttgcccgacgatgctgaagactat
gtgcaccgcattggccgtaccggtcgtgctggtgccagtggtagctccatcagctttgcc
tgtgaagaatacgccatcaatttgcccgccattgaggaatacattgaacacagtattccg
gtcagcgaatttgatcgcagcgcactgctcacggatttaccggccccgaaaaagatagcc
aaacgtcaggtgaacagtcgtcgtaatactggcaaaaacaacagcggcaacaaccgcaac
cgtcaacgtcgacgcccacaaaagtcggcataa
DBGET
integrated database retrieval system
