Salinivibrio costicola: HBA18_03625
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Entry
HBA18_03625 CDS
T06511
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
HBA18_03625
Enzymes [BR:
scot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HBA18_03625
Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HBA18_03625
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GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
ExoX-like_C
Corona_I
Motif
Other DBs
NCBI-ProteinID:
QIR05543
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Position
1:complement(738413..739987)
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AA seq
524 aa
AA seq
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MKYRFVILSTLLLSGCQLTGDAQNTDIATKKTPVAATPVKATPTVSATKKQPTPATPTVL
SPQMQEDVWQRISMQLSLPVPNNSAIRQYRNWYLKYPNHIATVAERATPFLHLIVEKVEA
RNMPLEIALLPIVESSFDQFAYSHGRAAGLWQFVPATGERFGLEQNWWYDGRRDVAKATD
AALDYLEYLNGMFDGNWLHAIAAYNSGEGRVARAIRNNEKRGKPTDFWHLDLPKETSSYV
PKLIALGDVIRHKDKYGLEVPAIANKPALALVEPNIQMDLALAANYAGLSVSELQSLNPA
YNHWATAPAGPTHLLLPIDKVDRFNTELAKNNNQGLRVERYYVQSGDSLSEIAAHYNTTV
KVLQRANQLSTTRIRVGQPLMIPVSLKDESQYTLSAPQRLAALQAAERDGYKRTHTVRKG
DSFWTIARRYDVDYRQLAKWNGMSPRDTLSIGQKLVVWDKNDNAKRVRTITYQIRQGDSL
SSIAQRYNVSVSDLVKWNQLRKNAYIQPGQRLTLHIDISRSSGS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgttttgttatcttgagcaccctgttgctgagcggctgtcagctgacaggt
gatgctcagaatacggatatcgcaacaaaaaagaccccagtcgcggctactccggttaaa
gcaacaccgaccgtttccgcgaccaagaaacaaccgaccccagcgacaccaacggtactt
tcaccgcaaatgcaggaggatgtgtggcaacgaatcagcatgcagctgtcactgcccgtc
cctaataacagcgctatccgccagtaccgcaattggtacctgaaatatccaaaccatatt
gccaccgtcgcggaacgtgccactcctttcttgcacttaattgttgagaaagtagaagcg
cgcaatatgccgcttgagatcgcattgctacctatcgtcgaaagctcgtttgatcaattt
gcttactctcacggtcgtgccgctggcttatggcagtttgtaccagcaaccggtgaacgc
ttcggactggaacaaaattggtggtatgacggtcgtcgtgatgtggcaaaagccaccgat
gccgccttggactatttggaataccttaacggtatgtttgatggcaattggcttcacgct
attgccgcctacaattccggtgaaggccgcgtcgctcgcgcgattcgtaacaatgagaaa
cggggcaagccaaccgacttttggcacctcgatttacccaaagaaaccagtagctacgtc
cccaagctgattgcactgggcgacgtcattcgtcataaagataaatatggccttgaggtt
cccgccatcgcgaacaaacctgcactggcattggttgaacccaatatccaaatggaccta
gcactggcagccaactatgctggcctgagcgtgtcagagttacaaagccttaatccggct
tacaaccactgggcaaccgcgcctgccggtccgacccacttgttacttcccatcgataaa
gtcgatcgtttcaacaccgagctggcgaaaaataacaaccaagggctacgtgtggagcgt
tattacgtccaatcgggcgatagcctgagtgaaattgccgcccactacaacacgacggtc
aaggtactacagcgcgctaaccaactgagtaccacacgtatccgtgtcggtcagcctctg
atgatccctgtctcattgaaagacgaatctcagtacaccttaagcgcccctcagcgcctt
gctgcattacaagccgctgagcgcgacggttacaaacggacccatacagtgcgtaaaggg
gatagtttctggacaattgctcgccgttatgacgttgactaccgacaactggcaaaatgg
aatggcatgagtcctcgagataccttgagtattgggcaaaagctggtcgtttgggataaa
aacgataacgcaaaacgtgttcgtaccatcacttatcagattcgccaaggcgactcccta
agcagtatcgcgcagcgttacaatgtgtccgtatctgatctggttaagtggaatcagcta
cgcaagaacgcctatattcagccgggccagcgcctcaccctacatattgatatctcgcgg
agtagcggctcatga
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