Salinivibrio costicola: HBA18_03870
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Entry
HBA18_03870 CDS
T06511
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
scot
Salinivibrio costicola
Pathway
scot00550
Peptidoglycan biosynthesis
scot01100
Metabolic pathways
scot01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBA18_03870 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA18_03870 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
HBA18_03870 (mrdA)
Enzymes [BR:
scot01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HBA18_03870 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HBA18_03870 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QIR05591
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All DBs
Position
1:complement(788554..790440)
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AA seq
628 aa
AA seq
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MKRQRSQIRDHSAEAALFVRRAIVCFVGIIALVGILLTNLYHIQVVEHQDYQTRSNDNRI
KVVPVAPNRGLIYDRNGKLLAENRPVYHLEITPEQVDDMPATLARLQSLLSLSDSDIDNF
QKERRRSRRFNAVPLKTQLTDKEVAIFSAHQHQFSGVEIKAYLKRHYPYGDALTHVLGYV
AKINDRDIAKLRQKDVLNNYRATRDIGKLGIEKYYEPVLHGKAGYQEVEVNSRGRIIRTL
KYVPPVPGKDLILNLDIDLQLYIRGILGDRRGAVVVLDPKTSGVLAMVSTPSYDPNLFVH
GISSTQYSALLNDRDRPLVNRATLGIYPPASTVKPFIAVAALEEGIITTKTTRNDPGYWR
IPNSNTRPFRDWLPWGHGRVNIVQSIEESVDTFFYQIAYDMGIDKISLWMEKFGFGQYTG
IDIQEESSANMPNREWKMSRHRQPWYKGDTIPVGIGQGYWTATPMQMVKALTVVLNRGEV
RAPKLLMLSRDEQGMHKPTPEPYPPIKGVSDKYWDVALEGMRLVNHGRKGTARRSFRTAK
YVSGGKSGTAQVFGLGEDEEYNADEIAEHLRDHALYIGFAPFEHPKVAVSMVLENAGGGS
SNGAPIARRIFDHILIEKDAEENKEAKQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccaacgaagtcaaattcgcgaccatagcgccgaagcggcgctgtttgtccgc
cgagcgattgtctgcttcgtcgggattattgccttagtcgggatcttgctgaccaacctc
taccacattcaggtggttgagcaccaagattatcaaacgcgatcaaatgataaccgcatt
aaagtggtgcctgtcgcgcccaaccgcggtcttatctatgatcgcaacggcaaattgctc
gcagaaaaccgtccggtatatcatctcgaaatcacccctgagcaagtcgatgatatgccc
gccaccttggcgcgcttacagtcattactgtcgctatctgacagtgatatcgacaacttc
caaaaagaacgcagacgttcgcgtcgctttaacgcggtaccgctaaagacccagttaacc
gataaagaggtcgccatcttttccgcccaccagcaccagttttctggggtggaaatcaag
gcgtatctaaaacgccactacccttacggcgatgcgctgacccatgtgctcggttacgtt
gcaaaaatcaacgaccgtgatattgccaaactgcgtcaaaaagatgtgcttaataactat
cgcgcgacgcgtgacatcggcaaactcggcatagaaaaatattacgagcccgtgttgcat
ggtaaagcgggctatcaagaagtcgaggtgaatagccgaggccgaatcatccgcacccta
aaatatgtgccacccgtgccgggtaaggatttgatcctcaatctcgatattgatttacaa
ctttatatccgtggcatcctaggcgatcgccgtggtgctgtagttgtgctcgatccgaaa
acatctggcgttttagccatggtatcgacccccagctatgacccgaacctttttgttcac
ggcatttccagcacccaatacagtgccctgctcaatgacagagacagaccattggtaaac
cgtgcgacattaggcatctatccgccggcgtcgacggtgaagccctttattgccgtcgcg
gcactggaagaagggattattaccaccaagacgacccgtaacgatcccggttattggcgg
atccccaactctaacactcgccctttccgcgactggcttccatgggggcatggccgcgta
aatatcgttcagtcgattgaagagtcggtagacaccttcttttatcaaatcgcttatgac
atgggtattgataaaatctctttgtggatggagaagttcggcttcggccaatacactggc
atagatatccaagaagaaagcagtgccaatatgcctaaccgagagtggaaaatgagccgc
caccgccaaccttggtacaaaggtgataccattcctgtcggcattggtcagggctattgg
accgcaaccccaatgcaaatggtcaaggcactgaccgtggtattgaaccgcggcgaagtc
agagcgcctaaattactgatgttatcgcgcgatgaacaaggcatgcataaaccaacgcct
gaaccttacccacccataaaaggggtgagcgacaagtattgggacgtcgcccttgaaggg
atgcgattggttaatcacggtcgtaaaggcaccgcaagacgctcgttccgtaccgcaaag
tatgtctctggcgggaaatccggtaccgcgcaagtgttcggtttgggcgaagatgaagaa
tacaacgccgacgagattgctgagcacttacgcgatcatgcactttacattggctttgcc
ccctttgaacatcccaaggtggcagtctctatggtattagaaaacgccggaggcgggtca
agcaacggggcgcccatcgcccgtcgtatttttgatcatatcttgattgaaaaagacgct
gaagagaacaaagaggcaaaacaatga
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