KEGG   Salinivibrio costicola: HBA18_04740
Entry
HBA18_04740       CDS       T06511                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
scot  Salinivibrio costicola
Pathway
scot03030  DNA replication
scot03430  Mismatch repair
scot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBA18_04740
   03430 Mismatch repair
    HBA18_04740
   03440 Homologous recombination
    HBA18_04740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scot03032]
    HBA18_04740
   03400 DNA repair and recombination proteins [BR:scot03400]
    HBA18_04740
Enzymes [BR:scot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBA18_04740
DNA replication proteins [BR:scot03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBA18_04740
DNA repair and recombination proteins [BR:scot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBA18_04740
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: QIR05731
UniProt: A0ABX6K672
LinkDB
Position
1:969234..969965
AA seq 243 aa
MLHLDLKKKAPAQHVDWQAMLDTKREQVKHETLQAFYQQGWVAPDTPLKDVPFVALDFET
TGLDSEKDAIVSIGLVPFTLSRIRCQQAQHWIVNPNRPLAESSIVIHGITHSDIMNAPDF
SHVIEPLLSALAGAIVVVHYRRIEREFLDRAIKQRLGEGIIFPMVDTMELEARKHRTGKR
SLMDRIMRRPLASIRLADSRTRYQLPFYQSHHALTDAIATAELLQAQVAHDFSPDTPISD
VWS
NT seq 732 nt   +upstreamnt  +downstreamnt
atgttgcatttggatctgaaaaagaaagccccggcgcaacacgtggactggcaagccatg
ctggataccaaacgtgagcaggtgaaacatgaaacgctacaagcgttttatcaacaaggc
tgggtagcacccgacacgcctcttaaggatgtgccctttgtcgcactcgactttgaaact
acgggtttagacagtgaaaaggatgccattgtcagtattgggctggtgccttttactctt
agtcgcattcgctgccaacaggcgcagcactggattgtgaatcccaatcgtccgctggca
gagtcttcgattgttattcatgggatcacccattcagacattatgaatgcaccagacttt
tctcatgtaattgaaccactgctaagtgcgctcgccggtgcgatcgttgtggtgcattac
cgccgtattgagcgagagttccttgaccgtgcgattaagcagcgtttaggggaagggatt
atttttccgatggtcgacaccatggagcttgaggcgcggaaacaccgtactgggaagcgc
agcttgatggaccgtattatgcgtcgtcccctggcgtcgattcggttagccgatagccgt
actcggtatcagttgcctttttatcaaagtcatcacgccttgaccgatgccatcgccacg
gcagagttgttgcaagcacaagtggcccacgacttttcccctgacacaccgattagcgac
gtatggagctaa

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