Salinivibrio costicola: HBA18_05055
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Entry
HBA18_05055 CDS
T06511
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scot
Salinivibrio costicola
Pathway
scot00061
Fatty acid biosynthesis
scot00071
Fatty acid degradation
scot01100
Metabolic pathways
scot01212
Fatty acid metabolism
scot02024
Quorum sensing
scot04146
Peroxisome
Module
scot_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HBA18_05055 (fadD)
00071 Fatty acid degradation
HBA18_05055 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBA18_05055 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBA18_05055 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scot01004
]
HBA18_05055 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scot04147
]
HBA18_05055 (fadD)
Enzymes [BR:
scot01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HBA18_05055 (fadD)
Lipid biosynthesis proteins [BR:
scot01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HBA18_05055 (fadD)
Exosome [BR:
scot04147
]
Exosomal proteins
Exosomal proteins of breast milk
HBA18_05055 (fadD)
Exosomal proteins of breast cancer cells
HBA18_05055 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QIR05792
LinkDB
All DBs
Position
1:1038280..1039971
Genome browser
AA seq
563 aa
AA seq
DB search
MEKVWLNRYPSDVPAEIDPDAHRSLIEMFEHSVQKFADQTAFINMGQVMTFRKLEERSRA
FAAYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGCVAVNVNPLYTPRELEHQLTDS
GAKAIVIVSNFAHTLEKVVENTPVKHVILTSLGDQLPRAKGTLVNFVVKYVKKMVPKYHL
PDATSMRNALRRGRRMQYVKPFLKGDDVAFLQYTGGTTGLAKGAILTHRNMLANVYQAKG
TYQPVLNVGEELVVTALPLYHVFALTVNCLLFIEMGGQNLLITNPRDIPGFIKELQKYPF
TAITGVNTLFNALLHNEDFHELDFSNLRLTVGGGMAVQRAVAESWKKLTGKHLLEGYGLT
ECSPLVAAYPYDLRDYNGSIGLPVPSTEVRIVDENREDVADNQPGELLVRGPQVMQGYWN
RPEATRESIDEDGWLATGDVVQFDDDGFLHIVDRKKDMILVSGFNVYPNEVEDVVALHDK
VLEVAAIGQPDENSGEVVKICVVKKDPSLTRDDLIAHCRKHLTGYKVPRVVEFRDELPKT
NVGKILRRELRDEAPKAPQKASA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaggtttggcttaatcgttacccgtcggatgtgccggcggaaatagatccagat
gcccatcgctctttgattgagatgtttgaacactcagtgcaaaagttcgctgaccaaaca
gcctttattaacatgggccaggtcatgaccttccgtaagctcgaagagcgtagccgcgca
tttgcggcgtacctgcaaaacgagctgaaattacaaaaaggcgatcgtgtggcgatcatg
atgccgaatttgctgcagtatccgattgcgttgttcggtattttgcgagcgggctgtgtg
gcggttaacgtcaaccctttatatacgccgcgagagttggagcatcagttgactgactca
ggtgcgaaagcgattgtgattgtcagtaactttgctcacaccttggaaaaggtggtggag
aatacacccgttaagcacgtgatccttacgagcttaggggaccagctccctcgtgcgaaa
ggcacgttagtgaactttgtggtcaagtacgtcaagaaaatggtaccgaaataccatttg
ccggacgcaacgtcgatgcgtaatgcgctccgccgtggccgccgtatgcagtatgtaaaa
cctttcttaaaaggtgatgatgtcgctttcctccagtacacgggtggtaccactggattg
gcgaaaggcgctatcttgacgcaccgcaacatgttggccaacgtctaccaagcgaaaggc
acctatcaaccggtgctaaacgtgggcgaagagttggtagtgaccgcgctaccgctttat
cacgtgtttgccctaaccgtaaactgcctgctgtttattgaaatgggtggacagaacctg
ttgatcaccaacccgcgtgatattccaggctttatcaaagagctacaaaaatatccattt
acggcgattacaggggtgaataccctctttaacgctttgctacacaacgaagactttcat
gagttagatttctccaacttacgccttactgttggtggcggcatggcggtacaacgtgct
gtcgcagaaagctggaaaaaactgaccggtaagcacctcctagaaggctatggcttaacc
gagtgctcaccgcttgtggcggcgtatccttatgatttgcgtgattacaacgggtcgata
ggtttgcccgtcccatctacggaagtccgtattgtggatgaaaatcgtgaagatgtcgcc
gataaccaaccgggcgaattgttggtgcgtggtccgcaagtgatgcaaggttattggaac
cgaccagaggcgacgcgtgaaagtatcgatgaagacggttggttggcaaccggtgatgtg
gtgcagtttgatgacgatggcttcttacacatcgtcgatcgtaaaaaagacatgatcctt
gtatcaggctttaacgtctatcccaatgaagtggaagatgtggtcgccctgcatgataag
gtattggaagtggccgcgattggtcagccagacgaaaactcaggcgaagtcgttaagatt
tgtgtggtgaaaaaggatccgtcgctgacccgtgatgatctgatagcgcactgccgtaag
cacctgaccggttataaagtgcctcgcgtggttgaattccgcgatgagctaccgaaaacc
aatgtaggtaaaatcttgcgccgagagttacgcgatgaagcccctaaggcgccgcaaaaa
gcgtctgcttga
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