Salinivibrio costicola: HBA18_05290
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Entry
HBA18_05290 CDS
T06511
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scot03032
]
HBA18_05290 (gyrA)
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_05290 (gyrA)
Enzymes [BR:
scot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HBA18_05290 (gyrA)
DNA replication proteins [BR:
scot03032
]
Prokaryotic type
DNA Topoisomerases
HBA18_05290 (gyrA)
DNA repair and recombination proteins [BR:
scot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBA18_05290 (gyrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPR_SYO1
Motif
Other DBs
NCBI-ProteinID:
QIR05835
UniProt:
A0ABX6K6I6
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All DBs
Position
1:1091429..1094098
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AA seq
889 aa
AA seq
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MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPDVLPTRVPNLLVNGASGIAVGMAT
NIPPHNITEVINGCLAYIDNEDITIDELMEHIPGPDFPTAAMINGRKGIEDAYKTGRGKI
YLRAKAEIEADKHGKETIVVNEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDGM
RIVIECRRDAVAEVVLNNLYAQTQLQTSFGINMVALDNNQPKLFNLKGMLECFVNHRREV
VTRRTVYELRKARERAHILEGLAVALANIDEVIELIRRAPTPAVAKQELQAQGWSLGGVS
AMLEAAGVDSARPEWLAPEFGARDDGSYYLTEQQAQAILDLRLHKLTGLEHDKILDEYKS
LLEQIAELMHILASTERLMEVIREELEAIRDSYGDKRLTEITAASADIDIEDLINEEDVI
VTWSHEGYVKYQALSDYEAQRRGGKGKSATRMKDEDFIERLLVANTHDTILCFSTRGRMY
WLKVYQLPHASRNARGKPIVNLLPLEDDERITTILPVREYAEDKYVFMATAHGTVKKTPL
TDFSRPRSAGIIAVNLREGDSLIGAQLTDDNSEVMLFSQFGKVVRFVASNETVRAMGRTA
AGVRGIQLAEKDQVVSLIVPQSDGDILTVTENGFGKRTALEEYPTKSRATKGVVSIKVSE
RNGDVVGAIQVCTGDELMLITNAGTLVRTRAEEVSQVGRNTQGVRLIRVSDDEKVVGLQR
IEEPDEEEMEALANEAAANATATSDAPASETSSEDNDDTPSETDSDQDA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgctaaagagatcacgccagtcaatatcgaagaggagctgaaaagctcg
tatctcgactatgcaatgtctgtcattgttggccgagctcttcctgacgtgcgtgatggc
ctaaagccagtacaccgccgcgttttattcgcgatgaatgtacttggcaacgactggaac
aagccatataaaaaatcggcccgtgtggtcggtgacgtaatcggtaaataccacccacac
ggtgatagcgcggtttacgacactattgttcgtatggcgcagcctttctcactgcgttat
atgttggtggatggccaaggtaactttggctccattgatggtgactcggccgcggcgatg
cgttacaccgaagtgcgcatggcaaaaattgcccatgagctcctcgcggatctagataaa
gaaacagtggactacgtacctaactatgacggtacggagcaaatccctgatgtattaccg
acgcgcgtgcctaacttgttagtgaatggcgcttctggtatcgcggtggggatggcaacc
aacatcccacctcataacatcaccgaagtgatcaacggctgtctggcgtatatcgataac
gaagatatcaccatcgatgagctgatggagcacattccgggacctgatttcccgaccgcg
gcgatgatcaacggccgtaaaggcatcgaagatgcttataagaccggtcgaggcaaaatc
tatctacgtgcgaaggcggagatcgaagcggataaacatggtaaagaaaccattgttgtc
aatgagatcccgtatcaagttaacaaagcacgcctgattgaaaagattgctgagcttgtc
aaagataagaaaattgaaggcatttcagcgctgcgtgacgagtcagataaagacgggatg
cggattgtgatcgaatgtcgccgcgacgcggtggcagaagtcgttctcaacaacctgtat
gcccagactcagttgcaaacgtcgtttggtatcaacatggtggcgctggataacaaccag
ccaaaactcttcaacctcaaagggatgttggagtgttttgtcaatcaccgccgtgaagtg
gtcactcgtcgtactgtgtatgaattacgcaaagcgcgtgagcgtgcacacatccttgaa
ggtctagcggttgcgctggctaacatcgatgaagtgatcgagcttattcgccgagcgccg
accccagcagttgccaaacaagagctacaagcacaaggctggagcttaggtggcgtgtct
gccatgttggaagcggcgggtgttgattctgctcgccctgagtggttagcgcctgagttt
ggtgcacgtgatgacggttcctactatctgactgagcaacaagcgcaagcgattctggat
ttgcgtttgcataagctgactgggctcgagcacgacaagatccttgatgaatacaaatcg
ctgctggaacaaattgctgaattaatgcatatcttggccagcaccgagcgtttgatggaa
gtgatccgcgaagagcttgaggcgattcgtgatagttatggcgataagcgcctgactgag
atcacggcggcaagcgctgacattgatatcgaagatctgatcaacgaagaagatgtcatc
gtgacatggtcacacgagggatatgttaaatatcaagccttgagtgactatgaagcgcag
cgtcgcggtggtaaaggtaaatcagccacgcgcatgaaagatgaagatttcattgagcgt
ctgttggtagcaaatacacacgacactatcttgtgcttctcaacacgtggccgcatgtac
tggttgaaagtgtatcaactgccacatgcttcgcgtaacgcacgcggtaaaccgatcgtc
aacttgctgccattggaagacgacgagcggatcaccactattctgccggttcgtgaatat
gcagaagacaaatacgtctttatggccactgcgcacggcaccgtgaagaaaaccccgctg
actgactttagccgtccacgcagcgcgggcattattgccgtgaacctgcgtgagggtgat
agtcttattggcgcgcagctgactgatgataacagcgaagtcatgctgttctcacaattc
ggtaaagtggtgcgctttgtagcgtctaacgagacagtacgagcaatgggccgtaccgcg
gcaggtgtccgcgggattcagctcgcagagaaagaccaagttgtttccctgattgtgccg
cagtcggatggtgacatcttgacggtgacggagaacggctttggtaaacgcacggcgctg
gaagaatatccaacgaagagccgtgcgaccaagggcgtggtctcgattaaagtctctgag
cgtaatggtgacgttgtcggtgccatccaggtatgcaccggtgatgaactgatgttaatc
accaatgccggtaccctggtacgtacccgcgcggaagaagtcagccaagtgggccgtaat
acccaaggcgtacgactgatccgcgtcagtgatgatgaaaaagtggttggtcttcagcgt
atcgaagagccggatgaagaggaaatggaagcactggctaacgaagcggcggcaaatgcc
actgcaaccagtgacgcacccgcctctgagaccagctctgaggacaatgatgacacaccg
agtgagacggatagcgatcaagacgcttaa
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