KEGG   Salinivibrio costicola: HBA18_06160
Entry
HBA18_06160       CDS       T06511                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
scot  Salinivibrio costicola
Pathway
scot02020  Two-component system
Brite
KEGG Orthology (KO) [BR:scot00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HBA18_06160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:scot02022]
    HBA18_06160
Two-component system [BR:scot02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HBA18_06160
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA AAA_16 MCM DUF815 Pre_tape_measure IstB_IS21 AAA_2 nSTAND3
Other DBs
NCBI-ProteinID: QIR05987
LinkDB
Position
1:1277784..1279133
AA seq 449 aa
MTLQTLPRIALIEDDEIVRQTTCQWLELAGFEVEAFSHGKAGLDAVLQHPFDAVVSDVKL
PDVDGLSILNELELHQVATPVLFITGHGDVDMAVGALQNGAFDFIEKPFEPERLSQRVSE
AVDSYRQQASTQERQAYLARISGLEKVLIGQSRVMQQLREQVAKLARIDTNVIIYGETGC
GKELVATSLHNESARQAQRFVPINCGAIPENLFESELFGHESGAFTGANQRRIGKFEYAH
KGTLFFDEVESMPASMQVKVLRALQEHTIERVGGNQSIAIDTRVIAAAKADLNGHETFRQ
DLYYRLNVAQIHLPPLREREDDALILFEHFTRQTNPETRLASEADRHAILSYSWPGNIRE
LRNVAVRFALDDGISVMEILSNRPSSTMEAVQSDVPLLIQLHNFERKVLHECLVAHQGRI
HEVMLALDLPRRTLNQKMKKFGLNRADYT
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgacgttacagacactcccgcgcattgccttgattgaagatgacgagattgttcgccag
accacctgccagtggttggagttggcaggctttgaggtggaagcatttagtcatgggaaa
gccggattggatgcagtgctacagcacccgtttgatgcggtggtcagcgacgtaaaactc
cctgatgttgatggattatcgattctgaatgagcttgagctgcatcaggtggccacgcct
gtgttgtttattaccggacacggtgatgttgatatggccgtgggggcgttgcaaaacggg
gcgtttgattttatcgaaaagccttttgagcccgagcgtttgtctcagcgtgtatccgag
gcggttgatagttatcgccagcaagcatcgacgcaagagcgacaagcctatttagcgcgt
attagtggactggagaaagtgctgattggccaaagccgagtgatgcaacaacttcgtgag
caggtggcgaagctggcgcgtattgacaccaatgtgatcatttatggggaaacgggatgt
ggcaaagagctggtggctaccagcttacacaatgaaagtgcgcgacaagcccaacgtttt
gtgccgataaactgcggcgccatcccggaaaacttatttgaaagtgagctgttcggccat
gagtcaggggcgtttaccggtgccaatcagcgccgcattggtaagttcgaatacgcgcac
aaaggtaccttgttttttgatgaagtcgagagcatgccggcaagtatgcaggtgaaagtg
ttgcgcgcgcttcaagagcacaccattgaaagagtgggagggaaccagtcgatagcgatc
gatacgcgggtcattgcggccgctaaagccgatctcaatggccatgaaaccttccgacaa
gatttgtactaccgtttaaatgtggcacaaatccatcttccaccgttaagagagcgtgaa
gatgatgcgttgatcttgtttgagcactttacccgtcagaccaatccggagacacgcctg
gccagtgaggcggatcgccacgccattttgtcttactcatggccgggtaatattcgtgag
ctgcgtaacgtcgcagtgcggtttgccttggatgatggcatttcagtgatggaaatactg
tccaatcgcccttcatcgaccatggaagccgttcaatcggatgttccgcttttaatccag
ctacataactttgagcgcaaggtgctacacgaatgcttggtggcgcatcaagggcgtatt
catgaagtgatgttggcgcttgatttacctcgccgcaccttgaaccaaaaaatgaagaaa
tttggactcaaccgcgcagactatacctga

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