Salinivibrio costicola: HBA18_07490
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Entry
HBA18_07490 CDS
T06511
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scot01002
]
HBA18_07490
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
HBA18_07490
Peptidases and inhibitors [BR:
scot01002
]
Cysteine peptidases
Family C82
HBA18_07490
Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HBA18_07490
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QIR06230
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Position
1:complement(1580905..1582644)
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AA seq
579 aa
AA seq
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MKIRPDAYLANLLIVFSLILSPVHAASPNSSSSVRFLTESAGQSLSADEHHKRAYQHARD
WLQAAAPDATVLAYPDLLTRDYLEHGFVLLWERDDARYELETQVNVISLAGISPEFEWRA
WQLRQLREQGQDLAYDVFATDTLYALLSYQAAIPQKGKQWFFGAQHRAPLPAPALPMREQ
VFQAGLDHTLYAFLYHRRPANQQYRALVTEIIRLQQDANQLWPTVALNGLVRPNEAVATT
FALNLVENLRRQGFWGEDQRLQAIDGHSVRYGGDLLAAVREFQGQHGLTVDGIIGPSTAR
WLNRDAQDRIRLLALNAERLRLWPDNQPNRIVVNIPDYRMTLWFDDQSVFESKVVVGRTS
RRTPLFSSRLDSVVLNPSWNVPQSIVRRDILPKLARDESYLSQNHYRILPDWHSDQSIDP
TTIDWQQVRVDGFPYRLQQAPGKLNALGRFKFNTPNRNAIYLHDTPARSLFSKSRRAFSS
GCIRVEYAEELANVLLDLSGQRLTDYQTYLDATQTKWISLRRPLAVQTIYQTAWVTEDGR
VAFRDDVYAYDTKPNRDVTTREPSYLTQQRPLQQNEHTQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaggccggatgcctatttggctaaccttctgattgtattcagcttaattttg
tcgcctgtccatgcggcatcgcctaacagcagtagcagtgtgcggtttttgaccgaatca
gccggacagtctttgtcagccgatgagcatcataaacgcgcctatcagcatgcccgagat
tggctgcaagcggccgcgccggatgccactgtgctcgcctatcctgatctactcacccgc
gactatctggaacacggattcgttttgctgtgggagcgagacgatgcgcgctatgaactt
gaaacacaggtgaacgtgatttcgctcgctgggatcagccccgagtttgaatggcgagca
tggcaattacgccagcttcgcgagcaaggccaagatttggcatacgatgtgtttgcgact
gataccctctatgcactgctcagctatcaggccgctattccccagaaaggaaaacaatgg
ttttttggcgctcaacatcgcgcgccacttccggcccctgctttgcccatgcgggaacag
gtatttcaggctgggttagaccatacgctttacgcctttttataccatcgtcgcccagct
aatcagcaatatcgcgcgttagtgaccgaaattatccggctacaacaagatgcgaaccaa
ctttggccaacggtggcattaaacggattagtcagacccaatgaggcggtagcgacaacc
tttgcgttgaatttggtagaaaatctgcggcgacaagggttttggggggaagatcaacgg
ctacaagcgattgatgggcacagcgttcgttatggcggtgacttgttggcggccgtgcgc
gaattccaagggcaacatggactgacggtggatggtatcattggtccatcgacggcacga
tggctaaatcgtgatgcgcaagaccgcattcgattgctcgcgctcaatgctgagcggctt
cgcctatggccggataatcagccgaatcgtattgtggtcaatattcccgattaccggatg
accttatggtttgatgatcaaagtgtgtttgaaagtaaggtcgtggttggacgcacatcg
cgccgtacaccattgttttcgtctcggcttgattcggtggtgcttaaccccagctggaat
gtgccgcaaagtattgtgcgacgggatattttgccaaagttagcgcgcgatgagtcttac
ctgagccaaaaccattatcgaattctgcctgattggcacagcgatcaaagcatcgatcca
accactattgactggcagcaagtgcgggttgatgggtttccttaccgcttgcagcaagcg
ccgggcaagctaaatgccttgggacgatttaaatttaacacccctaatcgcaatgcgatt
tatctgcacgatacgccggcacgtagcttgtttagcaaatcacgccgcgcgtttagttcc
ggctgcattcgggtggaatatgccgaggagctggccaatgtgctgctcgatttgtcagga
caacgtttgaccgactatcaaacctatctggatgcgacgcaaaccaagtggatcagtttg
cgtcgtccactcgccgtacaaaccatatatcaaacggcgtgggtgacggaagacgggcgc
gttgcatttcgagatgatgtttacgcctatgacaccaaacctaatcgagatgtcacgacg
cgggagccgagttatttgactcagcagcgaccgctacaacaaaacgaacatactcagtag
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