Salinivibrio costicola: HBA18_08210
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Entry
HBA18_08210 CDS
T06511
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scot
Salinivibrio costicola
Pathway
scot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA18_08210 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scot03019
]
HBA18_08210 (groL)
03110 Chaperones and folding catalysts [BR:
scot03110
]
HBA18_08210 (groL)
03029 Mitochondrial biogenesis [BR:
scot03029
]
HBA18_08210 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scot04147
]
HBA18_08210 (groL)
Enzymes [BR:
scot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HBA18_08210 (groL)
Messenger RNA biogenesis [BR:
scot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HBA18_08210 (groL)
Chaperones and folding catalysts [BR:
scot03110
]
Heat shock proteins
HSP60 / Chaperonin
HBA18_08210 (groL)
Mitochondrial biogenesis [BR:
scot03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HBA18_08210 (groL)
Exosome [BR:
scot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HBA18_08210 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HBA18_08210 (groL)
Exosomal proteins of breast cancer cells
HBA18_08210 (groL)
Exosomal proteins of colorectal cancer cells
HBA18_08210 (groL)
Exosomal proteins of bladder cancer cells
HBA18_08210 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
QIR06364
LinkDB
All DBs
Position
1:1742156..1743742
Genome browser
AA seq
528 aa
AA seq
DB search
MAAKEILYSDDARQKMLRGVNILADAVKVTLGPKGRHVVLDKSYGAPTITKDGVSVAKEI
TLEDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQAFINEGLKAVASGMNPMDLKRGI
DKVTEAAIAKLREMAKPCSEKHAIQQVGSISANSDNDIGELIAQAMDKVGRNGVITVEEG
QGLANELSVVEGMQFDRGYLSPYFITHQNSGTVELDNPYILLVDKKISNIRELLPILEAV
AKSSRSLLIIAEDVDGEALTTLVINNMRGIVRTAAVKAPGFGDNRKAMMHDIAALTAGTL
VTEELGIALEDVTLEQLGSAKKVTISKDTTTIIDGAAEESALKDRIATLERQLESTSSQY
DKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
QIAHALRDLKGDNDDQNVGIRLALRALEEPLRQIAINAGHEGSVVANAVKAGSDQYGYNA
ATGEYGNMIDMGILDPAKVTRSALQFAASVAGLMITTETMVTDAKHAD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagagattttatattctgatgatgctcgtcaaaaaatgctacgcggtgtc
aatatcctcgccgacgcagtaaaagtgaccttagggcctaaaggccgtcacgttgtgctt
gataagtcttatggcgcgccaaccatcaccaaagatggggtatcggttgccaaagagatc
accttagaagacaaatttgaaaacatgggcgcccaaatggtcaaacaggtcgcgtctaaa
gccaacgatgaggccggagacggcaccacaaccgcaaccgtactggctcaagcgtttatc
aacgaaggcttgaaagcggttgcatcgggaatgaaccccatggatctcaaacgcggtatt
gataaggtcactgaggctgccatcgcaaagctacgtgaaatggcgaaaccgtgcagtgaa
aagcacgctattcaacaagtcggtagcatttcagccaacagcgacaacgacattggcgaa
ctcattgcgcaagccatggacaaagtcggacgtaatggcgtcattaccgttgaagagggc
caagggctcgcgaatgaattatcggtcgttgaagggatgcaattcgaccgcggttatttg
tcaccctattttattacgcatcaaaacagtggcaccgtcgagctcgacaatccttacatc
ctgttagtcgacaaaaaaattagcaatattcgtgaactgctgccaatcctcgaggcggta
gcaaaatcatcacgctcgctgctgattatcgcagaagatgtcgatggtgaagccctcacg
accttggtgatcaacaatatgcgcggcattgtacgtaccgccgccgtcaaagcgcccgga
tttggggataatcgcaaagccatgatgcatgatattgccgcattaaccgcaggtacgctt
gtcaccgaggagctgggcattgcgcttgaagacgtcacgctagagcagttaggcagcgcg
aaaaaagtcaccatcagcaaagacaccaccaccattattgacggtgccgcagaggaaagt
gcactcaaagatcgcattgcgactctcgaaagacagcttgagagcaccagctcgcaatac
gacaaagagaaacttcagcaacggattgccaagctctccgggggcgtcgcagtgattaaa
atcggtgccgcgaccgaagtcgaaatgaaagagaaaaaggatcgcgtggatgatgctctg
catgctacccgtgctgcggttgaagaagggatcgtggccggcggcggtgtcgcattgatt
caaatcgcgcatgcgctgcgtgatctgaaaggtgacaacgacgatcaaaacgtggggatc
cggcttgccttacgcgcccttgaagagcctctgcgtcaaattgcgataaacgcaggtcac
gaagggtcagtggttgcaaacgcggtcaaagcaggcagcgaccagtatggctacaacgcc
gcaaccggtgaatatggcaacatgattgacatgggcattttggacccagcgaaagtcacg
cgctcggcgctccaatttgcagcgtccgttgccggcctcatgatcaccaccgaaacgatg
gtgaccgacgccaagcacgctgactaa
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