Salinivibrio costicola: HBA18_08730
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Entry
HBA18_08730 CDS
T06511
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scot
Salinivibrio costicola
Pathway
scot03030
DNA replication
scot03430
Mismatch repair
scot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBA18_08730 (holB)
03430 Mismatch repair
HBA18_08730 (holB)
03440 Homologous recombination
HBA18_08730 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scot03032
]
HBA18_08730 (holB)
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_08730 (holB)
Enzymes [BR:
scot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBA18_08730 (holB)
DNA replication proteins [BR:
scot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBA18_08730 (holB)
DNA repair and recombination proteins [BR:
scot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBA18_08730 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
QIR07372
LinkDB
All DBs
Position
1:complement(1832439..1833371)
Genome browser
AA seq
310 aa
AA seq
DB search
MWSHWQHLLTQQRLPHALLLAAPIGSGRGELVSVLAKTRLCQTQTEQPCGHCHSCQLYAA
GNHPDVHWLKPEKPGKQISIDAVRQCQRKATETSQLGGARFIIIESAEMLGEAAANALLK
TLEEPPSSCHFVLLSDSLDTLLATIISRCSVWKAPQPEMQVAKQWVEQALQRDVPYHAVA
LYRGAPLAAKEFVASGGLDHHHAVVTQLADYLVTRSGLFDTLDQLVSHYPASLDWASYFL
LDVMKWRQGATNALIHHHHQPVVVKVAEALETHQLHSQLRALHHMQRQLTKHSGLNTELV
ISQWLLTIGE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctcactggcaacacttactgacgcaacaacgtttgccgcatgcgctattgctc
gcggcgccaatcggcagtggccgtggcgagttggtaagcgtgctggcaaaaacacgctta
tgccaaacacagacagagcagccttgtgggcactgccatagctgtcagctttatgcagcc
ggcaatcacccggatgtacattggctaaagccagaaaaacccggcaaacaaatcagcatt
gatgcggtgcgtcaatgccagcgtaaagcgactgaaacgtctcaactgggtggcgcacga
ttcattattatcgaatcggcagaaatgctcggtgaagctgccgccaatgcattactcaaa
acgcttgaggagccaccctcatcctgtcattttgtcttgctcagtgattcgctagacacc
ttactggcgacaatcatcagccgttgtagcgtgtggaaagcgccccagccggagatgcag
gtggccaagcaatgggtcgagcaagcattacagcgagatgtgccttatcatgcggttgcg
ctatatcgtggcgcaccattggcggcaaaagaatttgtggcctcagggggattggatcat
caccatgcggttgtgactcagctagcggactacttggtcacacgctcgggcctatttgac
acgctcgaccagttggtttcacactatcccgcttcattggactgggccagctactttttg
cttgatgtgatgaagtggcgccaaggggcgaccaacgcgctcattcatcaccatcaccaa
cccgtggtagtaaaagtggctgaggcgctagaaacccatcaattacacagtcagctgcgc
gcgctacatcatatgcaacggcaactgaccaagcattcagggctaaacacggaacttgtg
attagccagtggttattaacgattggagaataa
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