Salinivibrio costicola: HBA18_09155
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Entry
HBA18_09155 CDS
T06511
Name
(GenBank) LPS chain length-determining protein
KO
K05790
lipopolysaccharide biosynthesis protein WzzE
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
HBA18_09155
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Gene cluster
GFIT
Motif
Pfam:
Wzz
GNVR
DUF1848
Phage_holin_2
Motif
Other DBs
NCBI-ProteinID:
QIR06517
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Position
1:complement(1931888..1933024)
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AA seq
378 aa
AA seq
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MDDKNQAVAPQNITPPTFYQVHEDAIDIRELCSAIWAGKLTIITFTLLFSICAIFYALQA
QEWWSSKAEISLPSVTDISEFQEQVNQYQTIFNAATGLDEKNVPVLNKQLSDLVDKENIF
LRFTSLFSATQTKLDFFNQNEEFQRIKKMFGAQGATMSQDDVSGRQFYQSWLNRFKIEQD
RLSMRDIISVQSVTAESSYILLTDYISFVSSRLNEQLYSDLSSIVKSETLAIERQKDSLK
LIAKNTLKQEIERTENALKIAQSADINTPIPNQSNQELFPIHLGVNAISAKLSILKSLKD
PSILEPKLSTLMAKIANLKMINIKQEKIQPFSVLEMPSKPLSRDKPKRVLIVIFGTFVGG
MLGLVIILLRFTWNRHQK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtggacgataaaaatcaagctgtagcaccgcaaaacataacgcctcctactttttatcag
gtgcacgaggatgcgattgatatcagagagctctgttcagcaatatgggccggaaagctt
actattatcacttttactttattattttccatttgtgcgattttttatgcgttgcaggca
caagagtggtggtcaagcaaagcggagatatcactacctagtgttaccgatatatctgaa
tttcaggagcaagttaatcaatatcaaacaatatttaacgctgcaacaggattagatgaa
aaaaatgtacctgttctcaataaacagttatctgatctagtcgataaagaaaatatattt
ttgcgatttacatcgttattcagtgcaacccaaacaaaacttgatttctttaatcaaaat
gaagaatttcaaaggataaaaaagatgtttggcgctcaaggtgctactatgtcgcaagac
gatgtttctggtcgtcaattttatcaaagctggctgaaccgttttaagattgagcaagat
agactctcgatgagagatattatatcagttcaatctgtgactgcagagagtagctacatt
ctgcttactgattatatttcctttgtgagcagtcggcttaatgaacagctatatagcgat
ctatcctcaatcgtgaaaagcgaaacattggcgatagagcgccaaaaagatagcttaaag
ttgattgctaagaatacgctaaaacaagaaatagaacgaaccgaaaatgctctcaaaatt
gctcagtctgcggatattaatacacctattcctaatcagagtaatcaagagttatttcct
atacatcttggcgtcaatgctatttcagctaagctatcgatactcaaaagtctcaaggac
ccgagtattttagagccaaagctgagtacgctcatggctaaaatagcgaacttgaaaatg
ataaatatcaaacaagaaaaaatacaaccttttagtgtgctggagatgccgtcaaagcca
ttgtctcgcgataagcctaagcgggtattaattgtaatattcggtacttttgttggtggt
atgctaggtcttgtcattatattgctgcgatttacatggaaccgccatcaaaaatag
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