Salinivibrio costicola: HBA18_10770
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Entry
HBA18_10770 CDS
T06511
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_10770
DNA repair and recombination proteins [BR:
scot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HBA18_10770
Archaeal homologous recombinant proteins
HBA18_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Branch
ABC_ATPase
DUF4972
ABC_tran
AAA_15
nSTAND3
AAA_21
DUF87
Motif
Other DBs
NCBI-ProteinID:
QIR06812
UniProt:
A0ABX6K6J6
LinkDB
All DBs
Position
1:complement(2280566..2284333)
Genome browser
AA seq
1255 aa
AA seq
DB search
MKILALRGENLASIQHPFELDFSKGPLGDSGLFAITGKTGAGKSTLLDAICLALYDKIPR
FQANKKNDADIGLGDPATRVKANDVRSILSRGKGEGYAEVDFFAHDGSRWRAHWSVRRAR
GKADGRIQASEHWLENLTTGQRFAGKKQEVLSEIERLVGLSYEQFRRAVMLPQGDFAAFL
KASADDRAALLERMTGTEIYSRLSQMAHERARDEKQALDQLMQQLGDIQLLSEDEEQQLV
DEQAQYQQAVKHHQHQLKMLNDYRQQHTHLAQAQQALDDAQVALDEAEQEKAGVEARRET
LAQIERAQAAREDLNTLQRYQWQSLSLGKDLAALARDEQAVAADYERQADRWREANRALT
DAEQAWADIEPKVREAQQIETQLASLDEQMREQNITLNEEQQKWRQAQQTLEQTRAHAQH
LVHRETIIAEQLAAFGDFGHVAEHYQPVFDNLKQFLDCQDALAALSDEHRQRQQQAQQWR
PQRDKLEQDIAQVDASSDQLKTKRAAAEPDRLIAEQEAEQARYSQLQSTRHLQEAVLNEA
HNWQYWDERCQHNQLEFEKFDAIFRDSQTHLTRLKDTVTRQQAQVDEARHSLQQAMAVME
LEDLRQALNEGDPCPLCGATEHPYLHHAPVVESLIDQQQARLAELQATLNQSQAEYYYWQ
KQHQQSDHACAELREQGQVWQAERDQYEKGLRVAIAELDSDIDRQTPLRDVLIDIEARAQ
QTQADYVACYQAMTERQQQLAHIQQIDAALSELQQAREQLVARRHHLDQALTECETRLSA
IDEQWHQQQAQRDSRCEALDKQLGKGQWQASLQQVGSARYIRQMEQKIQQYRALQAEREG
MEEEKQRTDTELATLTQQCQSLSDAIQSRQTQLVNLAQQHQQRMAARQALVGDQDLASLE
TEYKSRIDAQRQRRAEAEKAYTQASEQRAGLQARQQTLQQQRQDANQHYRTAVRRWIQWQ
PALGMSQYTLMAHLSLSEAWRADERQALNQIEARYQEAKTRFEEREQQLNHCHQAIATAK
AWFDEQALTDDETVLETQQAEWQHAQEQAKQRVFDIRHRLTQAEQARQQAGSLTDKIDTQ
RSKTEQWLKLADLIGSASGAKFRNLAQSLTLAQLVEIANEHLASLSPRYALQTVPDSLLA
LQVVDHDMGDEVRSVESLSGGESFLVSLSLALALASLAADTRQLGSLFIDEGFGTLDPDS
LEMALSCLDTLQADGRQIGVISHVSTLVERIGAQVRVDSQGGGASRVLVTQQGVG
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggcattacgtggcgagaacctggccagtattcaacacccgtttgagttg
gacttttcgaagggccctttgggtgatagcggtttgtttgcgatcactggcaaaacgggg
gctggtaaatccacgttgttagatgctatctgtcttgcgctatacgacaaaatcccgcgc
tttcaagccaacaaaaagaacgatgcggatattggtctcggcgatcctgcaacccgagtt
aaagccaacgatgtgcgcagtattttgtcgcgaggaaaaggtgaaggttacgcagaagtc
gacttctttgcccatgacggcagtcgctggcgtgcccattggtcggtacgtcgcgcgcga
ggcaaagccgatggccggatccaagccagtgagcattggctcgaaaacctcaccaccggc
caacgttttgcaggaaagaaacaggaagtgctcagtgaaattgagcgtctggtcgggctc
agctacgagcagtttcgtcgtgcggtgatgctcccccaaggggattttgcggcttttttg
aaagcgtcagcagatgatcgcgcagcactgctggagcggatgactggcaccgaaatttac
agccgtttatcccaaatggcccatgagcgtgcccgtgatgaaaaacaagcactggatcag
ctcatgcaacagctcggtgacattcagctcctgagcgaagatgaagagcagcaattggta
gatgaacaagcccaataccaacaggcggtcaaacatcatcaacaccaactcaaaatgctg
aacgactatcgccaacaacacacccacttagcgcaggcgcaacaagcgcttgatgacgcg
caagtggcactggatgaggcggaacaagaaaaagcgggtgtggaagcgcgccgagagaca
ttggcacagattgaacgtgcccaagcggcgcgagaggatctcaatacgctgcagcgttac
cagtggcagtccctatccttggggaaagatctagctgcactagcccgagatgaacaggct
gttgctgccgactatgagcgacaggcggatcgttggcgagaagccaatcgcgcattgacc
gatgccgagcaagcgtgggctgatatagagccgaaggtgcgtgaggctcagcaaatcgag
acccaattagccagtcttgatgagcaaatgcgtgagcaaaacatcaccctcaatgaagaa
cagcaaaaatggcgtcaagcgcaacagacccttgaacaaacccgtgcccatgcacagcat
ttggtgcatcgtgaaacgatcattgctgagcaactggcagcgtttggcgatttcggtcac
gtggctgagcactatcagccggtgtttgacaacctcaagcagtttcttgattgccaagat
gcgctagccgcactgagtgatgagcacagacagcgacagcagcaagcccagcaatggcgc
cctcagcgcgataagcttgagcaggatattgcgcaagtggatgccagcagcgaccagtta
aaaacaaaacgagcggctgcagaacccgatcgcctgatcgcggagcaagaagccgaacaa
gcgcgctatagccaattgcagtctacccgtcatctacaagaggcggttttaaatgaagca
cataactggcaatactgggacgagcgctgccaacataatcagttggagttcgaaaaattt
gatgccattttccgcgatagccaaacccacctaacgcgtttgaaagacacggtaacgcgc
caacaagctcaggttgacgaagcacgtcacagtttgcagcaagcgatggccgtgatggag
ttggaagacttgcgtcaggcgcttaacgagggagacccttgtccgctttgtggggcgact
gagcatccttacttacaccatgcgcctgtagtggaaagcttgattgatcagcagcaagcg
cgtcttgctgagctgcaagcgacactcaatcaaagccaagcagaatattactactggcaa
aagcaacaccaacaaagtgatcatgcatgtgctgagttgcgagagcagggacaagtgtgg
caggcggagcgtgatcaatacgaaaaagggctgcgtgttgccatcgctgaattggatagt
gacatcgacaggcagacgccactgcgtgatgtgctcatcgatattgaagctcgtgcccaa
cagacgcaagcggactatgtggcctgttatcaagccatgaccgaacgtcagcaacagctt
gcccatattcagcagattgatgcggcactcagtgagttgcaacaagctcgagagcagctt
gttgcccgtcgtcaccacttagaccaagcgctaaccgaatgtgaaacacgccttagcgcc
attgacgaacaatggcaccagcaacaagctcagcgtgatagtcgctgcgaagcactcgat
aaacagctaggcaaaggccaatggcaggccagcttacaacaagttggctccgcacgttac
attcggcaaatggagcaaaaaatccagcaataccgcgctttgcaagcggagcgtgagggg
atggaggaagaaaagcagcgtaccgacaccgagcttgccacgctcacacagcagtgtcag
agcttgtcagatgccattcagtcacgtcagacgcagttggtgaacttggcccaacaacat
cagcagcgtatggcggcgcgacaagcgctggtgggggatcaggatcttgcgagcttagaa
actgagtacaaatcacgcatagacgcgcagcgccagcgtcgagctgaggcggaaaaggcg
tatacgcaagccagtgaacagcgcgccggcttgcaagcccgtcagcaaactttgcagcag
caacggcaagatgctaatcagcactatcgtaccgccgttaggcgttggatccagtggcaa
cctgcgttgggaatgagtcagtatactttgatggcgcatttatcattgagcgaggcttgg
cgggcggatgaacgccaagctttaaaccagattgaggcgcgctatcaggaagcaaaaaca
cgctttgaagaacgtgaacagcagctaaatcattgtcatcaggccattgcgaccgccaaa
gcgtggtttgatgaacaagcgctgacagatgacgagacagtcttggagacgcagcaagcc
gagtggcaacacgcgcaagagcaggctaagcagcgtgtgttcgatattcgtcatcggctg
acgcaagccgagcaggcacgtcagcaagcggggagtttaacggacaaaattgatacccag
cgcagcaaaacggaacaatggctaaaactggccgacttaattggctcggccagcggtgcc
aaatttcgtaaccttgcccaatcactcacactcgcccagctggtggagattgccaacgag
caccttgcttcgctctcccctcgctacgcgctgcaaaccgtacccgacagtttgttagca
ttgcaggtggtggatcatgatatgggagatgaagtgcgcagcgtggaatccctctctgga
ggagagagtttcttggtttctttgtcgctggcactggcgctcgcctcattagcggcagat
acccgtcagttaggatcgctgtttatcgatgaaggctttggcaccttggaccctgacagc
ttagagatggcgctgtcgtgtctcgataccctgcaggcggatggacgccaaattggtgtg
atctctcatgtgagtacgttggtcgagcggattggcgcccaagttcgcgtagacagtcag
ggcggaggtgcaagtcgcgtgctggtcacacagcaaggtgttggctag
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