Salinivibrio costicola: HBA18_11000
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Entry
HBA18_11000 CDS
T06511
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_11000 (radA)
DNA repair and recombination proteins [BR:
scot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBA18_11000 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
SLFN-g3_helicase
GvpD_P-loop
RecA
AAA_22
Rad51
AAA
ABC_tran
AAA_14
Zn_ribbon_Thio2
DUF7125
AAA_24
Viral_helicase1
AAA_16
AAA_29
nSTAND3
Zeta_toxin
PAXNEB
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
QIR06848
LinkDB
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Position
1:complement(2335371..2336747)
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AA seq
458 aa
AA seq
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MAKTKRAYVCNDCGADFPRWQGQCSACGAWNTITEVRLAASPQVARNEKYAGYAGSAEGK
VQTLQEIDLQEVPRLSSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMVGLAQH
LPTLYITGEESLQQVAMRADRLGLPKDKLKLLSETSVETICQVAKKEQPKIMVIDSIQVM
HVGDVQSAPGSVSQVRESAAALTRYAKQHNVAIFMVGHVTKDGTLAGPKVLEHCIDCSIL
LDGSSDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEQTSGSSVMV
VWEGTRPLLVELQALVDYSQLANPRRVAVGLEQNRLALLLAVLHKHGGLQMSDQDVFVNV
VGGVKVTETSADLALLLALISSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERLMEAAKH
GFKKAVVPKANMPKQPLEGMQVFGVSKLSDALDVLEDL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaaaacgggcctacgtgtgtaatgactgtggtgccgattttccccgctgg
caagggcaatgctcagcgtgcggtgcgtggaataccatcactgaagtacgccttgccgcg
tctcctcaagtcgcgcgcaacgaaaaatatgccggctacgcggggagtgcggaaggcaaa
gtacagacgttgcaagagattgacttgcaagaagtgccacgcctgagcagtggttttaaa
gagctagaccgtgttcttggtggtgggattgtgcctggtgcggccattttgattgggggc
aaccctggcgccggtaaaagtaccttgctattgcaaaccatggtgggcttagcgcagcac
ttaccgacgctatacatcaccggtgaagagtcactccaacaggttgcgatgcgtgctgac
cgacttgggcttcccaaagacaaactcaagctgttatccgaaaccagcgtagaaaccatt
tgtcaggtcgctaagaaagagcaacctaaaatcatggttatcgactccattcaagtcatg
catgtcggtgatgtgcaatcggcaccgggtagcgtgtctcaagtacgcgagtcagccgcc
gccttaacgcgctacgcgaaacagcacaatgtggcgatatttatggttggccatgtgacc
aaagacggcaccttggccgggccaaaagtgctcgagcactgtattgattgttcgattcta
ctcgatggttcaagtgacagtcgctttagaaccttacgcagccacaaaaaccgctttggg
gcggtaaacgaattgggtgtgttcgcgatgaccgggcaagggctgaaagaagtcagtaac
ccttcggcgattttcctttcccgtggtgaagaacagacgtcgggaagctcggtgatggtg
gtatgggaagggacccgccctttgttggtagagctacaagcgctggtcgactattcgcag
ctagctaatcctcgtcgtgtcgcggtgggtttagaacaaaaccgactggcgttattgttg
gcggtgttgcacaaacatggtgggctacaaatgtcggatcaagacgtgttcgtcaatgtg
gtgggtggcgtcaaagtgaccgaaaccagtgccgacctcgctttgttgttggcgctgatc
tctagtttccgcgatcggcctttaccccgcgatttggtggtctttggtgaagtgggcttg
gccggtgaaattcgccctgtgccgagtggtcaagagcgcttgatggaagcggcgaaacac
ggctttaaaaaagcggtagtcccgaaagcgaatatgccaaagcagccgcttgagggcatg
caagtctttggggtaagcaagctgtctgatgcattggatgtgttagaagacctctaa
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