Salinivibrio costicola: HBA18_11130
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Entry
HBA18_11130 CDS
T06511
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scot03016
]
HBA18_11130 (truB)
Enzymes [BR:
scot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HBA18_11130 (truB)
Transfer RNA biogenesis [BR:
scot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBA18_11130 (truB)
Prokaryotic type
HBA18_11130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QIR06874
LinkDB
All DBs
Position
1:complement(2378537..2379514)
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AA seq
325 aa
AA seq
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MARRQRRRGRPVDGIILLDKPTGMTSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICL
GEATKFSQFLLDSDKRYRVVAKLGERTNTSDADGEVVETRDVKVNLGLLERCIAKFRGET
QQIPSMFSALKYQGKPLYEYARQGIEVPREARTIKVYQIELLRFEGHEIEMEVHCSKGTY
IRTIVDDLGEMLGCGAHVTALRRIGVSGYPARNMVTLEQLESLLNQAREQEIQPKQLLDP
LLLPLDTAVQDLREINLLPVVASYALQGQAVQVPNAPTEGYVRLTAGEERQFIGVGEIDA
DGLVAPRRLVASRQPEPQTARSDNA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcaacgtcgtcgaggtcgtccggtggatgggattatcctactcgataaa
ccaaccggcatgacgtccaatgatgctttacaaaaagtaaaacgtatcttctttgcggag
aaagcaggccacacgggggcactggatccacttgcaaccgggatgctgccgatctgtttg
ggtgaggcaaccaagttctctcagtttttgctcgactccgataaacgttatcgagtggtc
gccaaactgggtgagcgtaccaatacctcagatgcagatggtgaagtggtagaaacccgt
gacgtcaaagtaaacctaggtttgcttgagcgttgtattgcaaaattccgcggggaaacc
cagcagatcccatcgatgttttcggcgttgaaataccaagggaaacctttgtatgaatac
gcgcgccaaggcatcgaagtaccacgtgaagcgcgtaccattaaggtctatcagattgaa
ctactgcgctttgaaggccatgaaatcgagatggaagtgcattgctcaaaaggcacctac
atccgcaccatcgttgacgatttaggtgaaatgcttggctgtggtgcacatgtcacggcg
ctgcgtcgtattggtgtgtcgggctatcctgcgcgtaacatggtgaccttagagcagctt
gaaagtctgcttaaccaagcgcgtgagcaagagatccagccaaaacaactgctcgatcct
ttgctattgccacttgatacggcggtgcaagatctgcgcgagattaacctactgcccgtt
gtggcaagttatgcgctacaaggtcaagcggtgcaagtgcctaatgctccgactgaaggc
tatgtgcgtttaacggctggcgaagagcgtcagtttatcggtgtgggtgaaattgatgct
gatggtctggttgcgccgcgccgtttggtcgcgagccgtcaacctgagccgcaaaccgcg
cgcagtgacaacgcctag
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