Salinivibrio costicola: HBA18_11295
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Entry
HBA18_11295 CDS
T06511
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
scot
Salinivibrio costicola
Pathway
scot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA18_11295 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scot03019
]
HBA18_11295 (rppH)
Messenger RNA biogenesis [BR:
scot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HBA18_11295 (rppH)
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QIR06902
UniProt:
A0ABX6K6V0
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Position
1:complement(2416742..2417254)
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AA seq
170 aa
AA seq
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MIDGDGYRPNVGIVICNGHGQVLWARRYGQHSWQFPQGGIDDGESPEQAMFRELYEEVGL
TKKDVRILGTSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLKLECDESKVNVSRGGTPE
FDGWRWVSYWYPVRQVVSFKREVYRRAMKEFAPLAMPFKERKPRRRNKRG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatggcgatggctatcgtcccaatgtggggatagtaatatgtaacggccacggt
caggttctctgggctcgtcgatatggtcagcattcatggcagttcccgcaaggcgggatt
gatgatggggaaagtcccgaacaagccatgttccgtgagctttacgaagaagtggggctg
accaaaaaagatgtccgcatcttgggtactagccgtcactggctacgttataagctcccg
aaacgtttggtgcgttgggactccaagccagtctgtattgggcaaaaacaaaaatggttt
ttgttgaagctggaatgcgatgagtcgaaagtgaatgtgtcccgcgggggaaccccggaa
tttgatggctggcgttgggtcagttattggtatccggtacgtcaggttgtgtctttcaaa
cgcgaagtataccgccgcgcaatgaaagagtttgcgccgttagcgatgccttttaaggag
cgtaagcctcgacgtcggaacaagcgagggtaa
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