Salinivibrio costicola: HBA18_11335
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Entry
HBA18_11335 CDS
T06511
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
scot
Salinivibrio costicola
Pathway
scot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HBA18_11335 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scot01007
]
HBA18_11335 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scot03016
]
HBA18_11335 (lysS)
Enzymes [BR:
scot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HBA18_11335 (lysS)
Amino acid related enzymes [BR:
scot01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HBA18_11335 (lysS)
Transfer RNA biogenesis [BR:
scot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HBA18_11335 (lysS)
Prokaryotic type
Other AARSs
HBA18_11335 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
AsnA
pXO2-29_3rd
Motif
Other DBs
NCBI-ProteinID:
QIR06909
UniProt:
A0ABX6K7D9
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All DBs
Position
1:complement(2423898..2425406)
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AA seq
502 aa
AA seq
DB search
MTDQLQDENKLIAERRAKLNHIRENCKANGHPNDFRREHLAADLQAEFGEKEKAELEALD
HKVTIAGRIMAKRGPFLVVQDVSGRIQAYASKDVQKALKAEYHGLDIGDIIGVHGALHKS
GKGDLYVNMERYQLLTKALRPLPEKFHGLADQELRYRQRYVDLIVNEESRQAFQIRSSIV
TAIRNYMVEKHFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEDMLSRVALEVLGQSVM
PYGEHEINFAGPYPRMTMLDAIKQYNPDHAEIQALTYENAQDRDHLAAIAKSLKISVESF
WTAGQLMEEIFGETAEPQLIQPTFITEYPADISPLARRNDDNPFVTDRFEFFVGGREVAN
GFSELNDAEDQDARFKAQVEAKDAGDDEAMYYDADYINALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQQNG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagttacaagacgaaaataagctgatagccgagcgtcgcgccaaactgaat
cacatccgtgaaaactgcaaggcgaacggtcatcctaatgatttccgtcgcgagcacctt
gctgcggacctgcaagctgaatttggcgaaaaagaaaaagctgagctagaagcgctcgat
cataaagtgaccatcgcaggccgtatcatggcgaaacgtggtcctttcttggtggtacaa
gacgtctcgggccgtattcaagcctatgcctctaaagacgttcaaaaggcactgaaagcc
gaataccacggcttggatatcggtgacatcattggtgtacacggtgcgctgcacaaatcc
ggcaaaggcgatctgtatgtcaatatggaacgctaccagttgctgaccaaggccttgcgt
ccattgcctgaaaaatttcatggcttggctgatcaagagctgcgctatcgtcagcgctat
gtagatttgatcgtcaacgaagaatcgcgtcaggcgtttcaaatccgttccagtatagtg
actgccatccgtaactacatggtagaaaaacactttatggaagtagaaaccccgatgatg
catgtcatccctgggggcgcgactgcacgtccatttatcactcaccacaatgcgctagac
attgatatgtacttgcgtgtggcgccagagctttatctcaagcgtttggtcgtgggtggt
tttgagcgtgtgttcgagattaaccgcaacttccgtaatgaaggcttgtcgcctcgtcat
aacccagaattcactatgatggaattctatatggcgtacgcggattacaatgatctgatg
gacttgaccgaagacatgctatcgcgtgttgctctcgaggttctggggcagtctgtgatg
ccatatggcgagcatgaaattaactttgccggcccatacccacgcatgaccatgctggat
gcgatcaagcagtacaaccctgatcatgctgagatccaagcactgacctacgagaatgcg
caagaccgtgatcacctcgcggcgattgctaaatcactgaagatcagtgtggagtcattc
tggacggccggtcagctgatggaagaaatctttggtgaaaccgctgagcctcagttgatt
cagccaacttttatcactgagtatccagcggatatttcaccactggcacgtcgcaacgat
gataacccgtttgtaaccgatcgctttgagttctttgtcggtggccgtgaagtggcgaac
ggtttctcggagctgaatgacgcagaagatcaagacgcacgctttaaagcccaagtggaa
gcgaaagacgcgggcgacgatgaagctatgtactatgatgcagactacatcaacgcgctt
gagcatggtttgccgccaacggcaggacaggggattggtattgatcgcctagtgatgcta
tttaccaacacgcataccatccgtgacgttattctattcccagcgatgcgcccacaacaa
aacggctaa
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