Salinivibrio costicola: HBA18_11420
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Entry
HBA18_11420 CDS
T06511
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scot02000
]
HBA18_11420
Transporters [BR:
scot02000
]
Other transporters
Pores ion channels [TC:
1
]
HBA18_11420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Synapsin
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
QIR06922
LinkDB
All DBs
Position
1:complement(2444140..2446095)
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AA seq
651 aa
AA seq
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MSSRLRPVVVGMVLAGMPIASLSAAEAANTETMVITASGFEQVTAKAPASISVISRDQLE
GRYYRDVTDALKRVPGVVVTGGGDTTDISIRGMASKYTLILVDGRRTSSRETRPNSDGPG
IEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRRGEQDWHGNVQLSTVMQENR
ASGDEQSANFYLSGMLSDKVGLKLTGQNTQRQEDDIQYGYEDKSLRSLSTTLTYDHNDLH
RWELDLGVNAQDRRGHVGRSVPSDDSLCRGSCENSNNEYRRQSIAVSHKGNWDWGWSDSH
LQYEQSRNKSREMTIENTEFKTSLVRDFEAHTLTVGGSVVYAKLEDFTSNQASTKTSIDN
TQSAIFVEDEWRVLEPLSVTLGLRVDHDENYDYHASPRLYGVYQVTDNWIVKGGVATGFK
SPQLREITPNWAQVSRGGNIYGNPDLDPETSVNTELSLNYQGDNGITGSIGVFHNDFKDK
ITRVTCPDTVCTAGPNKWGSDPTYRVNVDEAVTQGVEASIFVPIGDTVDVSASYTYTDSE
QKTGEYKGQPLNQIPKSLAHGEVNWQATEKLSPWASVTYRGKEMDPVTGPSSRSNIEPAY
TMVDAGANYQLTDAIELQGAIYNLLDKSLDYDDYGYISDERRYWVGMNIHF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtcgtcttcgtcccgttgtggttgggatggtattagcgggaatgcctatagcc
tcactttctgccgctgaggcagccaacacggaaaccatggtgatcaccgcctctgggttt
gagcaggtgactgccaaagcacctgccagtattagtgtgatcagccgagatcagttagaa
gggcgctactatcgtgatgtgaccgacgcattaaaacgggtaccgggtgtggtggtgact
ggcggtggtgatacgacggacatcagtattcgcggcatggcttcaaaatataccctgatt
ttggtggatggccgacgaacctcaagccgtgaaacgcgccctaacagtgacggcccgggt
attgagcaggggtggctgccaccgctacaagcgattgaacgcattgaggtcattcgtggc
cctatgtcaaccctgtatggctcggatgcgattgggggggttatcaatattattacgcgt
cgtggtgaacaagattggcacggtaacgtgcagctgagcaccgtgatgcaagaaaaccgc
gcatcgggcgatgagcaaagcgcgaacttttacctatcaggcatgttaagtgacaaagtt
ggattgaaactgacgggtcaaaacacgcagcgccaagaagatgatatccagtacggctat
gaagataagtcattacgctctttatccaccaccttgacttacgatcataatgatttgcac
cgttgggagcttgacctcggcgtcaacgcacaagatcgccgtggtcatgtcggccgctcc
gtaccgagtgacgatagcctttgtcgcggcagctgtgagaacagcaataatgaatatcgg
cgtcagtcgatagccgtcagccacaaagggaattgggactggggatggtctgacagccat
ttgcaatacgagcagagtcggaataaaagccgcgaaatgaccatcgaaaataccgaattt
aaaaccagtttagtgcgtgatttcgaggcgcataccctgacggttggtggctctgttgtc
tatgcgaagttggaagattttacctccaaccaagcgtcgaccaagaccagtatcgataat
acgcaatcagcgatttttgttgaggacgaatggcgcgtcttggagccgttgagtgtgact
ttagggcttcgtgtggatcacgatgaaaactacgattaccacgccagtcctcgcctgtat
ggggtttatcaagttactgataactggattgtaaaaggtggggtggcgacaggctttaag
tctccgcagcttcgcgaaattacgcctaactgggcccaggtgagccgtggcggtaatatc
tacggtaaccccgaccttgaccctgaaacatccgtgaataccgagctgagcctcaactat
caaggggataacggcattacggggtcgattggtgtgttccacaatgactttaaagacaag
atcacccgtgtgacgtgccccgataccgtatgtactgcgggaccaaacaaatggggctcg
gatccaacttatcgtgtcaacgtggatgaagcggttacccaaggggtggaagcgagtatt
ttcgtgcccatcggtgacacggtggatgtaagtgccagctacacctataccgactcggaa
caaaaaaccggtgagtataaagggcagccacttaaccagatcccgaaatcgctagcgcat
ggtgaagtgaattggcaagcgaccgaaaaactcagcccatgggcgagcgtgacttaccgt
ggtaaagaaatggatccggtaacgggcccatcatcgcgcagcaatatcgagcctgcgtat
accatggtggatgccggggcgaactaccaactgaccgatgccattgagttgcaaggggcg
atatacaatctgctggataaatcgctggactatgacgactacggttatatcagcgatgag
cgtcgctactgggtagggatgaatatccacttctaa
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