Salinivibrio costicola: HBA18_12245
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Entry
HBA18_12245 CDS
T06511
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
scot
Salinivibrio costicola
Pathway
scot01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
HBA18_12245
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
HBA18_12245
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scot03036
]
HBA18_12245
Enzymes [BR:
scot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
HBA18_12245
Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
Peptidoglycan biosynthesis and degradation
Amidase
HBA18_12245
Chromosome and associated proteins [BR:
scot03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HBA18_12245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
AMIN
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Rsa3
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
QIR07069
LinkDB
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Position
1:complement(2630645..2632336)
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AA seq
563 aa
AA seq
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MMWQRLCTLMIAGLFSVTGWANQIENIRVWPAPNETRVVVDLADTPDFSYFSLTRPDRLV
IDLKQSSLATSLPKPVKGSDILTKIRKSSPPAKSTYRLVFELKDAAKPHIFALAPGGEYG
HRLVVDLPHPDKVDKNKPDLSAAEKKRRETVAALPFGTDDIVVAIDAGHGGNDPGAVGPT
RKYEKYVTLAIAKQTAARINAVPGMRAVLTRTGDYFVDLNRRSEIARQHKAHLLVSIHAD
GFHKPQPRGASVWVLSRRRANSEIGRWIERHEEQSNLLGGGSLLAQNNEDEYLSRAVLDL
QFSNSQKEGYNVATRVLKELGKVTKLHKSSPEHASLAVLKSPDIPSLLIETGFISNPQEE
RLLFQRDHQRRLADAVYHGIRNYFEHFPPDGTLFAARKNGVKHTVTAGQSLSLIANKYQS
SVAAIKSANGLSSNTLRVGQVLSIPNVDVAKLAGKGDNAASSTRTVTHTVSRGEFLGKIA
EHYQVSVSTIRRANSLKSDTLWVGQNLSIPGATTPDRKHKVKRGEYLGKIAANYGVTIES
LRQANSLRSDTLAVGQTLIIPGS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggcagcggctatgcaccttgatgatcgcgggtctgttcagcgtaacaggctgg
gccaatcagattgaaaatattcgcgtttggcctgcgcctaatgaaacacgggtcgtggtc
gatttagcggatacgccagactttagttacttttcattgactcgacctgaccgtttggtc
attgatttaaagcagagctcactggcgacctcgctcccaaagccggtcaagggcagcgat
atactgactaaaattcgcaaaagtagcccgcctgccaagtccacctatcgattggtgttt
gagttaaaagacgcggccaagccgcacatcttcgctttggccccgggtggcgagtatggc
caccgcttggtggtggatttgcctcatcctgataaagtcgataagaataaacccgacttg
agtgccgcggaaaagaagcgtcgagaaacggtggccgcgttgccgtttggcaccgatgac
atcgtcgtggcgatcgatgccggtcatggaggcaacgacccgggcgcggttggcccgaca
cgaaaatatgaaaaatacgtcacgctggcgatcgccaagcaaaccgccgcccgcattaat
gcggtacctgggatgcgagcggtactcacgcgcaccggtgattactttgtcgatttgaat
cgacgctcagagattgcccgccagcacaaagcccacttattggtttcaattcatgccgat
ggtttccacaagcctcaaccacggggggcgtcggtatgggtgttatctcgtcgccgcgcg
aacagtgaaattggtcgctggattgaaaggcacgaagagcagtccaacctattgggtggt
gggtccttattggcacaaaacaacgaagatgaatacctcagtcgcgcggtgctggattta
cagttcagcaactcgcaaaaagaaggctataacgtggcgacccgggtgcttaaagagttg
gggaaagttaccaagctgcataaatcaagccctgagcacgccagtttggctgtcctcaaa
tcgcctgatattccctctttgctgattgaaactgggtttatctctaacccacaagaagaa
cgactcctgttccaacgggatcaccagcgccggcttgccgatgcggtctatcacgggatc
cgtaattattttgaacatttcccgcccgatggcaccctattcgctgcccgtaaaaatggg
gtaaaacatactgtcacggcgggacagtcattgtctttgatcgccaataaataccaaagc
tcggtcgcggcgattaaatcagccaatgggctaagctctaacacgttgcgggtcgggcaa
gtgctgtctatccctaatgtcgatgtcgctaaactcgccggtaagggggataacgctgcc
tcttcgacgcgtacggttacccataccgtgagccgcggcgagtttctgggcaagattgcc
gagcactatcaggtgtcggtcagtaccattcgccgagccaatagtctgaaatcggatacg
ctttgggttgggcaaaacctgtcgattcccggtgccacgacgccggatcgcaagcacaaa
gtcaaacgtggcgagtacttaggaaaaatcgccgcgaattatggcgtgaccattgaaagc
ttgcggcaagctaattcgctgcgctctgacaccttggcggtggggcagacgttaatcatt
ccgggaagttga
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