Salinivibrio costicola: HBA18_12285
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Entry
HBA18_12285 CDS
T06511
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
scot
Salinivibrio costicola
Pathway
scot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HBA18_12285 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scot03019
]
HBA18_12285 (orn)
03009 Ribosome biogenesis [BR:
scot03009
]
HBA18_12285 (orn)
Messenger RNA biogenesis [BR:
scot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HBA18_12285 (orn)
Ribosome biogenesis [BR:
scot03009
]
Eukaryotic type
Pre-60S particles
RNases
HBA18_12285 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QIR07072
UniProt:
A0ABX6K6B6
LinkDB
All DBs
Position
1:complement(2636515..2637060)
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AA seq
181 aa
AA seq
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MAFSENNLIWIDLEMTGLDPDTHKIIEIATIVTDAQLNVLAEGPVLAISQPQSELDKMDD
WCTRTHTQSGLVARVEQSTISEQDAIEQTLAFLSQWVPEGASPICGNSVGQDRRFLYRHM
PALERYFHYRTVDVSTLKELVRRWKPEILNDFSKQGTHLALDDIRESIAELQFYRERILT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagtgaaaacaatttaatctggattgatctggaaatgactggattagatcct
gacacccacaagatcattgagatcgcgacaattgtcaccgatgcacagctcaatgtgttg
gcagaagggccggtattagcgatttctcagccacaaagcgaattggacaaaatggatgac
tggtgtacccgcacccatactcaatcgggattggtggcgcgcgtcgagcaaagcaccatt
agtgagcaagatgccatcgagcaaactctcgcctttttatcacagtgggtaccagaaggc
gcttcaccgatttgtggtaacagcgtagggcaagatcgacgctttctgtatcgtcacatg
ccagcactagagcgctatttccactatcgcaccgtggatgtcagtaccttgaaggaatta
gttcgacgctggaagcctgagatattgaatgacttttcgaagcagggaacgcacttagcg
cttgacgatatccgtgaatcaattgcagaattgcagttctatcgcgaaaggatcctgacg
atctga
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