Salinivibrio costicola: HBA18_12290
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Entry
HBA18_12290 CDS
T06511
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
scot
Salinivibrio costicola
Pathway
scot00730
Thiamine metabolism
scot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HBA18_12290 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scot03009
]
HBA18_12290 (rsgA)
Enzymes [BR:
scot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
HBA18_12290 (rsgA)
Ribosome biogenesis [BR:
scot03009
]
Prokaryotic type
GTPases
HBA18_12290 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
FeoB_N
MMR_HSR1
AAA_22
AAA_16
nSTAND1
ABC_tran
MMR_HSR1_Xtn
AAA_7
AAA_29
Septin
Roc
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QIR07073
LinkDB
All DBs
Position
1:2637140..2638192
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AA seq
350 aa
AA seq
DB search
MAKKKKLTKGQLRRVRSNQQRRIKQQDNDVQWDDALLENAREGRVITRFGQHADIEDPQT
GIIHRCNLRRTVQSLVTGDRVVWRPGKETLHGIAGVVEAVHERQSVLTRPDYYDGVKPVA
ANIDQVIIVAAILPELSLNIIDRYLIACEVLNIRPLIVINKVDLLDSEGREMVDELLDIY
RDIGYPIVLVSADTGEGMEALERHLDQHVSVFVGQSGVGKSSLVNTLLPDVDAQIGDVSE
NSGLGQHTTTAARLYHFDQGGDLIDSPGVREFGLWHLEPEQIAQGFVEFRDYLGGCKFRD
CKHGDDPGCLLRQAVEDGHISVERFDSYHRIIESMKEAKDNRQFSRNKQN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagaaaaagcttaccaaaggccaactacggcgcgtgcgatccaaccaacaa
cgtcggatcaaacagcaagataatgatgtgcaatgggatgacgcgctgctagaaaatgca
cgcgagggacgtgtgatcacgcgatttggccaacacgctgatatcgaggatccgcaaact
ggaatcatccatcgctgcaatctgcgtcgtaccgtgcaaagcttggtaactggcgaccgt
gtggtttggcgtccgggaaaagaaaccctgcatggcattgccggcgttgtcgaggcagtg
catgaacgccaatcggttctgacccgtcccgactactatgatggcgtaaaacccgttgcc
gctaacatcgatcaagtgatcatcgtagccgcgattttgcccgagttatcactgaatatt
attgatcgttatttgattgcctgcgaagtcttgaatattcgtcctctgattgtcatcaac
aaggtcgatttgctagatagcgaggggcgtgaaatggtggacgaattactcgacatctat
cgcgatattggctatcccatcgtgttggtgagtgccgataccggcgaagggatggaggcg
ctagaacgccatctcgatcaacatgtgagtgtctttgtcggccaatccggcgtgggaaaa
tcaagcttggtcaatacgctactgccggatgtggatgcgcaaattggtgacgtctctgaa
aactcagggttgggccaacataccaccaccgccgcgcgtttgtatcattttgaccaaggg
ggtgatcttattgactcccctggcgtgcgagaatttggtttatggcatttagagccggaa
caaatcgcacaaggctttgtcgaatttcgcgactatctgggtggctgtaaattccgtgat
tgtaagcacggcgatgatccaggttgcttgttgagacaagccgtggaagatggccatatc
agcgtcgagcggtttgatagctatcaccgcattatcgagagcatgaaagaagccaaagac
aaccgtcagttttcacgtaacaagcaaaactga
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