Salinivibrio costicola: HBA18_13030
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Entry
HBA18_13030 CDS
T06511
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
scot
Salinivibrio costicola
Pathway
scot00300
Lysine biosynthesis
scot00470
D-Amino acid metabolism
scot01100
Metabolic pathways
scot01110
Biosynthesis of secondary metabolites
scot01120
Microbial metabolism in diverse environments
scot01230
Biosynthesis of amino acids
Module
scot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBA18_13030 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBA18_13030 (dapF)
Enzymes [BR:
scot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HBA18_13030 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QIR07197
UniProt:
A0ABX6K6N8
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All DBs
Position
1:complement(2797858..2798688)
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AA seq
276 aa
AA seq
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MQVQFAKMHGLGNDFMVVDCVTQNAFFSPDLIRRLADRHRGVGFDQLLVVEPPYDPETDF
HYRIFNPDASEVSQCGNGARCFARFVRMKGLTNKHQISVSTQAGKMLLHIENDNQVRVNM
GEPEFTPGKIPFRANSQEKTYLMRVAEQTLFVGAVSMGNPHVVTVVEDVDHADVDTLGPL
LESHERFPERVNAGFMQILSRNTIKLRVYERGAGETQACGSGACAAVAVGIIQGLLDEQV
TVSLPGGDLRIRWRGPGHPLSMTGPATHVFDGQLQL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacagtttgcaaaaatgcacgggctgggcaacgacttcatggtggttgactgt
gtcacgcaaaacgcgttcttttcgccggatctgattcggcgtttggccgatcgtcatcgt
ggcgtcggctttgaccagctattggtcgtggagccgccttacgatcctgagacagatttc
cattatcgcatttttaatcctgacgcatcggaagtctcgcaatgtggcaatggtgcgcgc
tgctttgcgcgtttcgtgcgaatgaaagggctaaccaataagcatcagatcagcgtgagc
acccaagccggtaaaatgctactgcacattgaaaacgacaatcaggtgcgcgtgaacatg
ggcgagccggaattcacaccggggaaaattccgtttcgtgccaactcacaagaaaaaacc
tacttgatgcgggtggcggaacagaccttgtttgtcggcgccgtgagcatgggcaacccg
catgtcgtaactgtggtcgaggatgttgaccatgccgacgtggacaccttgggaccgcta
cttgaaagtcacgaacgcttccctgaacgggtcaatgccggctttatgcagatcctttcc
cgcaatacgattaagcttagagtgtacgagcgcggcgctggtgaaacccaagcctgtggc
agtggcgcgtgtgccgcggttgcagtcgggattatacaaggcctgcttgatgagcaagta
acggtgagtttacccggtggagatctccgcattcgctggcgtgggccgggtcatccctta
tcaatgacaggcccagcgacacatgtatttgatggacaattgcaattatga
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