Salinivibrio costicola: HBA18_14170
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Entry
HBA18_14170 CDS
T06511
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_14170 (phrB)
Enzymes [BR:
scot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HBA18_14170 (phrB)
DNA repair and recombination proteins [BR:
scot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HBA18_14170 (phrB)
Prokaryotic type
HBA18_14170 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CBM53
Motif
Other DBs
NCBI-ProteinID:
QIR07560
LinkDB
All DBs
Position
2:complement(161079..162518)
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AA seq
479 aa
AA seq
DB search
MHLVWFRRDLRCLDNRALHAACEANEPVVGLFVETPDQWAAHHMAPIQAGLIEARLKALR
DELGALNIPLLVTRAADYKKASETVATLANSLNINAVFVNREYELNEQNRDRQAQQQVEA
QGIDWYAYHDRNLFAPGTIRSGKGDAYKVFTPFKKACLRALESMDQSPLKAPVPRADDKR
LAAIFASLEPIEFDYPTKSVSAWPTTEKAILDKLRTYCREQAADYKTHRDFPAIEGTSQL
SPYLAIGALSPRQCLARLQSEHPNWREPDSGAATWLSELIWRDFYQEVSAQNPSISKKHC
FLEWGESVVWDNDNARFEAWKAGKTGFPIVDAAMQQLNTTGWMHNRLRMIVASFLTKDLL
IDWRWGEDYFMSKLIDGDFASNNGGWQWSASVGTDAQPYFRIFNPTTQGERFDSDGRFIR
RWLPALKEVPGKQIHQPWSWAEKYAQSLDYPKPIVDHAKQRKQALAIFEAAKNQPKESA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagtttggtttcgacgcgatctgcgctgcctcgacaatcgtgcactgcatgca
gcgtgcgaagcaaacgagcctgttgtgggcctttttgtggaaacaccggaccaatgggct
gcccaccatatggccccgattcaggcgggattgattgaagcaaggcttaaggcgctgcgt
gacgaactcggagcacttaacattccgctgctggtgacacgagccgctgactataagaag
gcgtctgaaacggtcgcaacccttgcgaattcgctgaatatcaacgccgtgtttgtgaat
cgtgaatacgagctgaatgagcaaaatcgcgatcgccaagcacagcaacaagtggaggcg
caaggcattgattggtacgcctaccatgaccgtaatctgtttgcgcccggcacgattcgt
tctggtaaaggcgacgcgtataaagtctttaccccatttaaaaaagcctgtctacgtgca
ttagaaagcatggatcagtcaccgcttaaggcaccagtcccacgtgctgacgataagcgg
ttagccgctatttttgcttctcttgagccgattgaatttgactatccaaccaagtccgtc
tccgcatggccgaccacggaaaaagccatcttagataagttacgcacttattgccgtgaa
caagcggctgattacaagacgcaccgggatttccctgccattgagggcaccagtcagctg
tcaccgtatcttgccattggcgcattgtcccctcgccaatgcctagcgcgattgcaatct
gagcatccgaactggcgcgagcctgattcaggcgcagcaacttggttgtcagagctaatc
tggcgcgatttctatcaagaagtgagtgcccaaaaccccagtattagcaaaaagcattgc
tttttagagtggggagagtctgtggtgtgggataacgataacgctcgctttgaggcgtgg
aaagcgggtaaaaccggctttccgattgtggatgctgcgatgcagcaattgaataccacc
ggatggatgcataaccgcctgcggatgatagtggcaagctttttaaccaaggacttgctc
atcgattggcgttggggggaggactactttatgtccaagctgattgacggcgactttgcg
tccaataacggtggttggcaatggtcagcgtcagttggcaccgatgcacagccttacttt
cgaatttttaatccgacaacccaaggggagcgcttcgacagtgatggccgcttcatacgt
cgttggttaccggcactaaaagaggtgcctggtaagcaaatccatcaaccttggtcgtgg
gcagaaaagtatgcgcagtcattagattaccccaaaccgattgttgatcatgccaagcag
cgcaaacaggcactagcgatttttgaggcggccaaaaatcagcccaaggagtctgcataa
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