Salinivibrio costicola: HBA18_14310
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Entry
HBA18_14310 CDS
T06511
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scot
Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scot03400
]
HBA18_14310
Enzymes [BR:
scot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HBA18_14310
DNA repair and recombination proteins [BR:
scot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HBA18_14310
Prokaryotic type
HBA18_14310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QIR07585
UniProt:
A0ABX6K7S5
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All DBs
Position
2:192780..194336
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AA seq
518 aa
AA seq
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MSAPISLVWLKRDLRLRDHAPLQAAIAAGRPLVILYLFEPLLLNDPHHSERHWRFVWQSL
CDLNQQLAPLGGQVTICQGEALAVFDAIHQQQAIGAVYSHQEIGVDATFSRDKAVAKWLA
SHQIPWHDFPTGAVIRGAKDRVDWDAEWQKVMRAPLADPDWQQARWLDTSLTLPALDHHN
WDSPAPRFQPGGPSWAYKTLQSFFRERGQSYQRHISKPLASRKSCTRLSPYLAWGNISLR
EMYQISLLHWQKKGWRRALVAMVSRLHWHCHFMQKFESEHHMEHRPVNRGYLHFEYANGP
QSDAHLLAWQQGHTGYPLVDACMRCLHATGYINFRMRAMLVSFLTHHLLIDWRRGVHHLA
QLFLDFEPGIHYPQFQMQAGVTGANTLRIYNPVKQSQEQDPEGAFIREWLPELSPLPDSL
IHTPWQMTDMEAMMYGVVLGEDYPKPIVDIEQTGKRARDILWSFRQQDAVRIEKARILAT
HVRPSSPEQTNSPRRADKRTKKSRLSATQSPGGNPDGA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccatcagccttgtgtggctaaaacgcgatttacgcttgcgggatcatgcc
cctttacaagcggccattgccgcggggcgtcccttggtgattttgtacctgtttgagcca
ctgctgcttaatgatccgcaccatagcgagcgccactggcgatttgtctggcaatcactg
tgcgatcttaatcagcagctggcgccgcttggcgggcaggtcaccatttgccaaggtgaa
gcactcgccgttttcgacgccatccaccagcagcaggcaattggcgcggtgtacagccat
caagaaattggcgtcgacgcgacattttctcgagacaaagcggtggcgaaatggctagca
agtcatcagatcccgtggcatgactttcccactggggcggtgatccgcggcgcgaaagat
cgggttgattgggacgcagaatggcaaaaggtgatgcgtgcccctcttgccgaccccgat
tggcaacaagcgcgctggctagacacatcacttacgctacccgcgctcgatcaccacaat
tgggattctcctgcgccacgctttcagcccggcgggccgagttgggcgtataaaaccttg
cagtcttttttccgcgagcgcgggcaaagctatcagcgccacatctctaaaccgctcgcc
agccgcaaaagctgtacccgactgtcaccctatcttgcatggggtaacatcagcttgcgc
gagatgtatcaaatcagcctcctccattggcaaaaaaagggttggcggcgtgcgctggtc
gctatggtgtcgcgtttgcattggcactgccattttatgcagaaatttgaaagcgagcac
cacatggagcatcgccccgttaatcgcggctacttacattttgagtacgcaaatggtccg
cagagcgatgcgcacctgctcgcatggcaacaaggtcataccggttatccgctcgtcgat
gcctgtatgcgttgcctacacgccaccggctatatcaactttcgtatgcgggcgatgctg
gtcagttttttaactcaccacctactgattgattggcgccgcggtgtccatcatttggca
cagctatttctcgattttgagcccggcattcactatccccagtttcaaatgcaggctggc
gtaacgggcgccaataccttgcgcatttataacccagtgaaacaatcgcaagagcaagat
ccggaaggggcatttattcgtgaatggttacccgagctttctcccttgcccgacagtttg
atccacaccccgtggcaaatgaccgacatggaagcgatgatgtacggggtggtgcttggt
gaagactacccgaaacctattgtcgatatcgaacaaaccggcaaacgtgcgcgtgatatt
ttatggtcgtttcgtcaacaagacgcggttcgtatcgaaaaagcgcggatactcgccacc
catgtgcgtccaagcagccctgagcaaacaaatagcccgcggcgcgcagacaagcgcact
aaaaaatcacgtttatctgcaactcaatcccctggaggcaacccagatggcgcataa
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