Salinivibrio costicola: HBA18_14960
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Entry
HBA18_14960 CDS
T06511
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scot
Salinivibrio costicola
Pathway
scot00061
Fatty acid biosynthesis
scot00071
Fatty acid degradation
scot01100
Metabolic pathways
scot01212
Fatty acid metabolism
scot02024
Quorum sensing
scot04146
Peroxisome
Module
scot_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HBA18_14960
00071 Fatty acid degradation
HBA18_14960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBA18_14960
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBA18_14960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scot01004
]
HBA18_14960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scot04147
]
HBA18_14960
Enzymes [BR:
scot01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HBA18_14960
Lipid biosynthesis proteins [BR:
scot01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HBA18_14960
Exosome [BR:
scot04147
]
Exosomal proteins
Exosomal proteins of breast milk
HBA18_14960
Exosomal proteins of breast cancer cells
HBA18_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
S-Me-THD_C
Motif
Other DBs
NCBI-ProteinID:
QIR07702
LinkDB
All DBs
Position
2:326151..327806
Genome browser
AA seq
551 aa
AA seq
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MSHIKPHDQILRWADERPNHVFLRQIRDRRFVDYTFADVADQAMRMVTALRDMGLQPGDK
VALISKNCAEWFIADLAMMMGSYISVPIFPTAGSDTIEHVVTHSESKAMFVGKLDDTKAL
KASLQTLSHIKTIAFPYPTVDCHYDWQELVASHEPTEERPVHLDNDVMSLVYTSGTSGLP
KGAILSYGGYCWSAQRLIDHIGIEPNDRLFSYLPLAHITERVYIMGSAILGGIPTAFPES
LDTFIEDVKMHRPTLFISVPRLWTLFQQRIQEKLPDARLNLLLSIPLVGSLVKKKIAKNL
GLDQARVLGCGSAPVAPALLRWYEKLGLHITEAWGMTESYAYSTLNYPFRADKIGTVGNA
GPGVEIKIADDQEILVKSQGLFSGYYKNEEATAETLVDGWLHTGDLGELDSEGYLSISGR
KNDTFKTAKGKFVAPVAIEKRLFELSNAEMLCVIGSGMPAPILLALPHHFPHFDRARYER
RVKKVIDTINSELESHQQIKGVLMIKEPWSIENGKLTPTLKIRRHKLEQEYHEVGANWPK
GTLVQWEEDWV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacatcaaaccacacgatcagattttacgctgggccgacgaacgccctaaccac
gtatttttacgccaaattcgcgatcgccgcttcgtggattacacctttgcagacgtcgct
gatcaggcgatgcgtatggtcacagcattacgtgacatgggcttgcaacccggtgacaag
gtggcgctgatctcaaaaaactgtgcggaatggtttattgccgatctggcgatgatgatg
ggcagttacatcagcgtgcccatttttccaacggccggcagcgacaccattgagcacgtg
gtcacgcacagtgaatctaaggccatgtttgtcggcaaactggatgacactaaagcgcta
aaagcgtcgttacagacgctatcacacattaagaccatcgcatttccatatcctacggtg
gattgccattatgactggcaggagttagtcgcaagtcacgaacccaccgaagagcgtccg
gtccatctcgataatgatgtgatgtcactggtgtatacctctggtacctctgggctcccc
aaaggggccattttgagctacggcggctattgttggtccgcacaacgcctgatcgaccac
attggtatcgagccgaacgatcgtttgttctcgtatctgccattggcccatatcacagag
cgcgtgtacatcatggggtcggccattttgggtgggatcccaaccgcgttcccagagtcg
ctcgatacctttattgaagatgtcaaaatgcatcgcccaacgcttttcatttcggtaccg
cgactgtggacgttgttccaacagcgcattcaagagaaattgccagatgcacgtcttaac
ctgctgctgagcattccacttgtcggtagtctggttaaaaagaaaatcgcgaagaacctt
ggccttgatcaagcgcgcgtattgggctgtggctcagcacccgttgccccggcactattg
cgttggtatgagaagctgggcctacatatcaccgaagcctggggaatgaccgaaagctac
gcatacagcacccttaactatccatttagggccgacaaaattggcaccgtcggcaatgca
ggacccggcgttgaaatcaagatagccgatgatcaggagatcttagtcaaaagtcagggc
ctatttagtggctattacaaaaatgaggaagccacggccgaaaccttggtggatggttgg
ctacacacgggggatttaggcgaactcgatagtgagggctacctgagtatctcagggcgt
aaaaacgatacgttcaaaactgcgaaaggcaaatttgttgccccagtggcgattgaaaaa
cgtttatttgagctgtctaacgctgagatgctctgtgtgatcggctctggcatgcctgcg
cctattttgcttgccctgcctcaccacttcccacactttgatcgagcccgctatgagcgc
cgagtgaaaaaggtgattgataccatcaacagcgagctggaatcccaccagcaaatcaaa
ggtgtgttgatgatcaaagagccttggagcattgagaacggaaaactcacgccaacactt
aaaattcgccgccataagctggagcaagagtaccacgaggttggcgcgaactggccaaaa
ggcaccttagtccaatgggaagaagactgggtctag
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