Spiroplasma corruscae: SCORR_v1c00400
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Entry
SCORR_v1c00400 CDS
T05302
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scou
Spiroplasma corruscae
Pathway
scou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCORR_v1c00400 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scou03021
]
SCORR_v1c00400 (rpoC)
03400 DNA repair and recombination proteins [BR:
scou03400
]
SCORR_v1c00400 (rpoC)
Enzymes [BR:
scou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCORR_v1c00400 (rpoC)
Transcription machinery [BR:
scou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCORR_v1c00400 (rpoC)
DNA repair and recombination proteins [BR:
scou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCORR_v1c00400 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
FleQ
Motif
Other DBs
NCBI-ProteinID:
ASP27815
UniProt:
A0A222EMV2
LinkDB
All DBs
Position
40477..44244
Genome browser
AA seq
1255 aa
AA seq
DB search
MLNKPNKKMIKIELASPDVIRSWSRGEVTKPETINYKTLKTEKEGLFDERIFGPTRNYEC
SCGKYKKVKNKGKVCERCGVEITESIVRRERMGHIELEEPVTHIWMLKVAPSRIASILDL
KTKEVEEVVYFVSYIVLDPGVSKHIKKGQVLDLGNGKASIKTREKLLKTLEDLKLNLKPE
EFSFKRATNLIEQLASPQSPFSMDEAATFISRHTGAKFGIGASAIEELLKNIDLGSEIEK
IKDDLREKKGSSDQSKLMKRLEILDSLKKSMSRPEWMILRVIPVIPPDIRPIIQLDGGRF
TTSEINDLYRRIIIRNERLKKVKSMGAPSIIVNNEKRMLQEAVDALLDNERKPRPVIGKD
KRALKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPRDMAITLFKPF
VIRKLQEDGHAENVKVAEKLISANDAKVWDVLEEVIKDRPVLLNRAPTLHRLGIQAFEPK
LVKGKAIRLHPLVTTAFNADFDGDQMAVHLPISEEAVAEARALMLGSKAILGPKDGKPIV
TPTQDMILGNYYITTEEKESDNPNILGQGTLFSSYDEVILAYETGSVSLNAIVGIPVCEL
KNKLFANEDQEKILITTVGKIIFNQMFVEKFPWIINSNILNAETEIKKFLVGFDVNIREY
IEKEYILQQPIKKKELSLIIERYFQSFGAQKTAQMLDNMKDLGFKFSSKSGTTISAADVV
AFTEKFEEFKVADQRVKDITNFYNSGMLTKTEKKRRVIAVWSNVKDTIQNKLEQVLKKNP
KNPVFVMADSGARGNVSNFTQLVGMRGLMNDPKGDIKEIPIKSSFREGLTVSEYFISTHG
ARKGMADVALKTADSGYLTRRLVDISQEIIVTQEDCNPAKGFWVHSIIETKHDNVIVPLK
DRLVGRFTFEDVEDNNNNIIVESNTLITADIADKILNAGVDDVQIRTILTCDTERGVCQK
CYGINLATGEVVTIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGGADITQGLPRIKELL
DITTPKGSIAIISQIDGVVKETKEEDGIISIVVGSEQDEKRYKSQYGAILRVEEGEHVIR
GQKLTEGAINIKELLEVARVEDVQNYILKEVQKVYRLQGIEISDKYIEIIIKQMLNKVKI
IDSGETELLPGEVISAKAFRNEVKDAILNNKKPPLAKNVIFGIKKAPLESDSWLSSASFQ
DTARVIVKAVIKGKVDKLAGLKENIMLGNLIPAGTGLTGSEDIIKKGKEVYDQEY
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataaaccgaataaaaaaatgataaaaattgaattagcttctcctgatgttata
agaagttgatcaagaggagaagtaacaaagcctgaaactattaactacaaaacattaaaa
acagaaaaagaaggattatttgacgaaagaatttttggtcctactagaaactacgaatgt
agctgtggaaaatataaaaaagtaaaaaataaaggtaaagtttgtgaacgttgtggtgtt
gaaatcaccgagtcaattgtaagacgtgaaagaatgggtcatatcgaattagaagaacct
gtcacacatatttgaatgttaaaagttgctccttcaagaatagcatctattttagattta
aaaactaaagaagtagaagaagttgtttattttgtaagttatatagttttagaccctggt
gtttcaaaacatattaaaaaaggacaagtacttgatttaggaaatggaaaagcaagcata
aaaacaagggagaaacttcttaaaacattagaggatctaaaacttaatcttaaacctgag
gagttctcatttaaacgtgcaacaaatttaatagaacaattagcttcacctcaaagtcct
ttttcaatggatgaggccgcaacttttatatcaagacatactggtgcaaagtttggtatt
ggagcaagtgctattgaagaattacttaaaaatattgatcttggaagtgaaatagaaaaa
ataaaagatgacttaagagaaaaaaaaggatcttctgatcaaagtaaattgatgaagaga
ttagaaattcttgactcgctaaaaaaatctatgtcaagacccgaatgaatgatactaaga
gtaattcccgttattcctccggacattagaccaattatacaattagatggtggtcgtttt
actacttctgaaataaatgatttatacagaagaattattataagaaatgaacgtctaaaa
aaagttaaatcaatgggtgcgccaagcataattgttaataatgaaaaacgtatgttacaa
gaagcggttgatgcgttacttgataacgaacgtaaaccaagacctgttataggaaaagat
aagagagctcttaaatctcttacttcaatccttaaaggtaagcaaggtcgttttagacaa
aacttacttggtaaacgtgttgactactcaggtagatctgttattgcaattgggccagat
ttaaaaatgtatcaagctggtatccctagagatatggctattacattatttaaacctttt
gtaataagaaaattacaagaagatggtcatgcagaaaacgtaaaagttgcagaaaaacta
atttcagcaaacgatgcgaaagtatgagatgttctagaagaagttattaaagatagacca
gttcttttaaacagagcacctacactgcatagactaggaattcaggctttcgaaccaaaa
cttgtaaaaggtaaggctataagacttcatccactagtaactactgcttttaacgcagac
tttgatggtgatcaaatggctgtccatttaccaataagtgaagaagctgttgcagaagca
agggcattaatgcttggttctaaagctatattaggtcctaaggatggtaaacctattgtt
acaccaacacaggatatgattcttggtaactactatataactactgaagaaaaagaatct
gataaccctaatatattaggacaaggtactttattctcaagctatgatgaagttattctt
gcttatgaaacaggaagtgtttcattaaatgcaatagttggtatcccagtttgtgaattg
aaaaacaagttatttgcaaacgaagatcaagaaaaaatattaataacaacagtagggaaa
ataattttcaaccaaatgttcgtagagaagttcccttgaattattaattcaaacatttta
aatgcagaaactgaaattaaaaaattcttagttggcttcgatgtcaatattagagaatat
attgaaaaagaatatattcttcaacaaccaattaagaaaaaagaattatcactaataatt
gaaagatatttccaatcatttggtgctcaaaaaactgctcaaatgttagataacatgaaa
gatcttggtttcaaattctcgtcaaaatctggtactacaattagtgcggccgatgttgtt
gcctttacagagaagtttgaagagtttaaagttgctgatcaaagagttaaagatataact
aacttctataactcaggtatgttgacaaaaactgagaaaaaacgccgagtaattgcagtt
tgatcaaatgtaaaagatacaattcaaaataaacttgaacaagttctgaaaaaaaatcct
aagaacccagtttttgtaatggcagactcaggtgctcgtggtaacgtttctaactttaca
caacttgtaggtatgagaggtcttatgaatgaccctaaaggtgacataaaagaaatccct
attaagtcttcattccgtgaaggtttaacagtttctgaatactttatttcaactcatggt
gcacgtaaaggtatggctgacgttgctcttaaaacagctgactcaggttacttaacacgt
aggttagttgatatttctcaagaaattatcgtaacacaagaagattgtaaccctgcaaaa
ggattttgagttcactcgattattgaaacaaagcatgataatgttattgttcctctaaaa
gatagacttgtgggtagatttacttttgaagatgttgaagataataataataacattatt
gtagaatcaaatacattaattactgcagacatagcagataaaattttaaacgctggagtg
gatgatgttcaaattagaactatattaacttgtgatacagagcgtggagtttgtcaaaaa
tgttatggtattaacttagcgaccggtgaagttgttacaattggtgaacctgttggagtt
attgctgcgcaatcaattggtgaacctggtacacaactaacaatgcgtacattccataca
ggtggtgttgccggtggcgctgatattacacaaggattacctcgtattaaagagttatta
gatattacaacaccaaaaggttcgatagctataatttctcaaattgatggtgttgttaaa
gaaactaaagaagaagatggaatcatatcaatagtagttggttctgaacaagatgaaaaa
cgttataaatctcaatatggagcaattcttcgtgttgaagaaggtgaacacgttattaga
gggcaaaaacttactgaaggtgctataaatattaaagaactcctagaagtagctcgtgta
gaagatgttcaaaattatattttaaaagaagttcaaaaagtttatagacttcaaggtatt
gaaatctcagataagtatattgaaattataatcaagcaaatgttaaataaagttaaaata
atagactctggtgaaactgaattattaccaggagaagttatctcagcaaaagcatttaga
aatgaagttaaagatgcaattttaaataacaaaaaaccacctcttgctaaaaatgtgatt
tttggtattaaaaaagctccactagaatcagattcttgattatcatcggcgtcattccaa
gatacagctagagttattgttaaagctgttattaaaggtaaggttgataaattagctgga
cttaaagaaaatataatgctaggaaacttaattcctgccggtactggattgacaggcagt
gaagatattattaaaaaaggtaaagaagtttacgatcaagagtattaa
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