Spiroplasma corruscae: SCORR_v1c02810
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Entry
SCORR_v1c02810 CDS
T05302
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
scou
Spiroplasma corruscae
Brite
KEGG Orthology (KO) [BR:
scou00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCORR_v1c02810 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scou03021
]
SCORR_v1c02810 (rpoD)
Transcription machinery [BR:
scou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCORR_v1c02810 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PADR1_N
HNH_repeat
HTH_19
Motif
Other DBs
NCBI-ProteinID:
ASP28055
UniProt:
A0A222ENI4
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All DBs
Position
321798..323192
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AA seq
464 aa
AA seq
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MGLENKKYSTFQEFKDRLWGYLEKNDNEISQEEIQEVLSKNFEDLDEDEIAQLFQELSEK
EVVFTDELIDDEDLVTLSSVGAVEDLTDLEDGFKSRDTERKNLKQANINSGPVKYRVGGI
SNETKIQDIIKSYFNQIGSSKILSKDEEVEFAKMLESSDEDEVKEGRDKLITSNLKLVIS
VARKHLNRGLDFADLIEEGNIGLMKAVDKFDYKKGFKFSTYATWWIRQAITRAIADQART
IRIPVHMVETINKLTRIERQLTQELGREPTPKEIAKVFGKGITAQKVVEIKKLSIEPISL
EKPFGDEDDTHFGDFVEDKDISSPDEYAEKEALREVMDDVFAEILAPREEKVVRMRFGIL
PTKLRTLIRLAKECEDETYEELVKEINNLDIHYDTPIEKIQKFRNSLIQLHLSKYDSPKT
LEEVGKELKVTRERIRQIEAKTIRKFRPTASNQKAKVLKDFFKG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggattagaaaataaaaagtatagtacatttcaagagtttaaggatagactttgaggt
tacttagaaaaaaatgataatgaaatttcacaagaagaaatacaagaggttcttagcaaa
aactttgaggacttagatgaagatgaaattgcacaattattccaagagttatctgaaaaa
gaagtagtgtttacagatgagttaattgatgatgaagatcttgttacattatcttcagtt
ggtgcggttgaagacttaacagatttagaggatggatttaagtcaagagacactgaaaga
aaaaatctaaaacaagctaatataaatagtggtccagttaaatatagagttggtggaatt
agtaatgaaactaagatacaagatataattaaatcatatttcaatcaaataggttcttca
aaaatattaagcaaggatgaagaagttgagtttgcaaaaatgttagaatcgagtgatgaa
gatgaagttaaagaaggaagagataaattaattacttctaacttaaaacttgttatttca
gttgcaagaaaacatttaaatagagggcttgattttgctgacttaatagaagaaggtaat
attggtttaatgaaagctgtagataaatttgactataaaaaaggatttaaattttcaaca
tacgcaacttgatgaataagacaagcgataacacgtgcaattgctgatcaagctagaaca
ataagaatccctgttcatatggttgaaacaattaataagttaactagaattgaaagacaa
cttacacaagagttaggaagggaaccaacaccaaaggagatagcaaaagtatttggtaaa
ggtattacagctcaaaaagttgttgaaattaaaaagctatctattgaaccgattagtcta
gaaaaaccatttggggatgaagacgatactcactttggtgattttgttgaggataaagac
atttcatctcctgatgaatatgctgaaaaagaagctttaagagaagttatggatgatgtt
tttgcagaaattcttgctcctcgtgaagaaaaagtagtcagaatgagatttgggatatta
ccaacaaagttaagaacattaattagacttgcaaaagaatgtgaagatgaaacatatgaa
gaactagtaaaagaaattaataacttggatattcattatgatacaccaatagaaaaaatt
caaaaatttagaaattctttaatacaattgcatctatcaaaatatgattctcctaaaaca
ttagaagaagtaggtaaagagttaaaagttacaagagaaagaataagacaaattgaagct
aaaactataagaaagtttagaccaactgcttcaaatcaaaaagcaaaagttttaaaagat
ttttttaaaggatag
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