KEGG   Spiroplasma corruscae: SCORR_v1c02810
Entry
SCORR_v1c02810    CDS       T05302                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
scou  Spiroplasma corruscae
Brite
KEGG Orthology (KO) [BR:scou00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SCORR_v1c02810 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scou03021]
    SCORR_v1c02810 (rpoD)
Transcription machinery [BR:scou03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCORR_v1c02810 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 PADR1_N HNH_repeat HTH_19
Other DBs
NCBI-ProteinID: ASP28055
UniProt: A0A222ENI4
LinkDB
Position
321798..323192
AA seq 464 aa
MGLENKKYSTFQEFKDRLWGYLEKNDNEISQEEIQEVLSKNFEDLDEDEIAQLFQELSEK
EVVFTDELIDDEDLVTLSSVGAVEDLTDLEDGFKSRDTERKNLKQANINSGPVKYRVGGI
SNETKIQDIIKSYFNQIGSSKILSKDEEVEFAKMLESSDEDEVKEGRDKLITSNLKLVIS
VARKHLNRGLDFADLIEEGNIGLMKAVDKFDYKKGFKFSTYATWWIRQAITRAIADQART
IRIPVHMVETINKLTRIERQLTQELGREPTPKEIAKVFGKGITAQKVVEIKKLSIEPISL
EKPFGDEDDTHFGDFVEDKDISSPDEYAEKEALREVMDDVFAEILAPREEKVVRMRFGIL
PTKLRTLIRLAKECEDETYEELVKEINNLDIHYDTPIEKIQKFRNSLIQLHLSKYDSPKT
LEEVGKELKVTRERIRQIEAKTIRKFRPTASNQKAKVLKDFFKG
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgggattagaaaataaaaagtatagtacatttcaagagtttaaggatagactttgaggt
tacttagaaaaaaatgataatgaaatttcacaagaagaaatacaagaggttcttagcaaa
aactttgaggacttagatgaagatgaaattgcacaattattccaagagttatctgaaaaa
gaagtagtgtttacagatgagttaattgatgatgaagatcttgttacattatcttcagtt
ggtgcggttgaagacttaacagatttagaggatggatttaagtcaagagacactgaaaga
aaaaatctaaaacaagctaatataaatagtggtccagttaaatatagagttggtggaatt
agtaatgaaactaagatacaagatataattaaatcatatttcaatcaaataggttcttca
aaaatattaagcaaggatgaagaagttgagtttgcaaaaatgttagaatcgagtgatgaa
gatgaagttaaagaaggaagagataaattaattacttctaacttaaaacttgttatttca
gttgcaagaaaacatttaaatagagggcttgattttgctgacttaatagaagaaggtaat
attggtttaatgaaagctgtagataaatttgactataaaaaaggatttaaattttcaaca
tacgcaacttgatgaataagacaagcgataacacgtgcaattgctgatcaagctagaaca
ataagaatccctgttcatatggttgaaacaattaataagttaactagaattgaaagacaa
cttacacaagagttaggaagggaaccaacaccaaaggagatagcaaaagtatttggtaaa
ggtattacagctcaaaaagttgttgaaattaaaaagctatctattgaaccgattagtcta
gaaaaaccatttggggatgaagacgatactcactttggtgattttgttgaggataaagac
atttcatctcctgatgaatatgctgaaaaagaagctttaagagaagttatggatgatgtt
tttgcagaaattcttgctcctcgtgaagaaaaagtagtcagaatgagatttgggatatta
ccaacaaagttaagaacattaattagacttgcaaaagaatgtgaagatgaaacatatgaa
gaactagtaaaagaaattaataacttggatattcattatgatacaccaatagaaaaaatt
caaaaatttagaaattctttaatacaattgcatctatcaaaatatgattctcctaaaaca
ttagaagaagtaggtaaagagttaaaagttacaagagaaagaataagacaaattgaagct
aaaactataagaaagtttagaccaactgcttcaaatcaaaaagcaaaagttttaaaagat
ttttttaaaggatag

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