Spiroplasma corruscae: SCORR_v1c03420
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Entry
SCORR_v1c03420 CDS
T05302
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scou
Spiroplasma corruscae
Brite
KEGG Orthology (KO) [BR:
scou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scou03019
]
SCORR_v1c03420 (cshB)
03009 Ribosome biogenesis [BR:
scou03009
]
SCORR_v1c03420 (cshB)
Enzymes [BR:
scou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCORR_v1c03420 (cshB)
Messenger RNA biogenesis [BR:
scou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCORR_v1c03420 (cshB)
Ribosome biogenesis [BR:
scou03009
]
Prokaryotic type
rRNA helicases
SCORR_v1c03420 (cshB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3605
Flavi_DEAD
AAA_19
PhoH
Occludin_ELL
PRK
Motif
Other DBs
NCBI-ProteinID:
ASP28116
UniProt:
A0A222ENN2
LinkDB
All DBs
Position
388324..389688
Genome browser
AA seq
454 aa
AA seq
DB search
MSFENFGLKKFLNDAIKEIGFKDPTSIQEKVIPLIKRRRSVIAQSHTGTGKTHAFLLPII
NNIKPDEKKVQSLIITPTRELARQIWQNTRELIKNNPDISCALYVGGEEYDKQSAALINK
QPQIVIGTPSRLKKLYEENFLQLTTSDNVIIDECDMIFELGFIDEVDFLISKINKQCNIS
LFSATLNNELKPFLKKYLRNSIYINNLENMTTNKNIEHILIWTKNKENKEVMRALTSTIN
PYVCLIFVNKKEEIKHLVSWFKEFKIENFTELHGGLDPRQRVNVQKRIKNMEFKWIIASD
VAARGIDIDGVSHVISINLPNDLSYYIHRSGRTGRNKYEGISYVLHNSDNEDKILKLKAK
QIVFTNYKLADGKLIKVEQKIKKPPKENTKLANETNKIINKYKSKKLKPGYKKKRKLEID
IIKRQLKRKHIKESIERIKKARYKKRRDELFDDE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaaattttggattaaaaaaattccttaatgatgcaattaaggaaatcggt
tttaaagacccaacaagtattcaagaaaaagtaataccattaataaaaagaaggagatca
gtaatagctcaatctcacactggaacaggaaaaactcatgcatttcttttaccgataatt
aataatataaaacctgatgaaaaaaaagtgcaatcattaattattactccaacaagagaa
cttgctcgtcaaatatgacaaaatactagagagttaattaaaaataacccagatattagt
tgcgcactatatgtaggtggagaagaatatgataaacaaagtgctgcgttaattaataaa
cagccacaaatagttataggaacaccatcaagattaaaaaaattgtatgaagaaaacttt
cttcagttaacaacttctgataatgtaataattgatgaatgtgacatgatatttgaatta
ggttttatagatgaagttgactttttaatatcaaaaattaataagcaatgtaatatttca
ttattttcagcaacactaaataatgaactaaaaccatttctaaaaaaatacttaagaaac
tcaatttacattaataatttagaaaatatgactacaaataaaaatatagagcatatatta
atatgaactaagaataaagaaaacaaagaagttatgcgtgcacttacttctactattaac
ccatatgtatgtttaatttttgttaataaaaaagaagaaattaagcatttggttagttga
tttaaagaatttaaaattgaaaactttactgaacttcatggagggttagacccaaggcaa
agagtaaatgtccaaaaaagaataaaaaacatggagtttaagtgaataattgctagtgat
gttgctgctcgtggtatcgacattgatggtgttagtcatgttatttcgattaatctacct
aacgacttaagttattacatccatagaagtgggagaactggtagaaataaatacgaagga
ataagttatgttttacataactctgataatgaagataaaatactaaaattaaaggcaaaa
caaattgtttttacaaactataaattagctgatggtaaactaataaaagttgaacaaaaa
ataaaaaaaccaccgaaagaaaatacaaagttagcaaatgaaactaacaaaataattaat
aaatataaatcaaagaaacttaaacctggttataaaaaaaagagaaaacttgaaattgac
attataaaaagacaattaaaaagaaaacatataaaagaatcaattgaaagaataaaaaaa
gcaagatataaaaaacgaagagatgaattgtttgatgatgaataa
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