Streptococcus parasanguinis ATCC 15912: HMPREF0833_10081
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Entry
HMPREF0833_10081 CDS
T01545
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF0833_10081 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10081 (xseA)
Enzymes [BR:
scp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF0833_10081 (xseA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF0833_10081 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RMI2
Glyco_tran_WecG
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AEH55112
UniProt:
F8DF39
LinkDB
All DBs
Position
77026..78417
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AA seq
463 aa
AA seq
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MFFGIIKLDHILQKGVPMSNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPNHQ
YFSLKDEKAVIQATVWAGVYRSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGV
GALAIQFEQLKKKLTEEGLFQDQWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGV
EIVLYPTKVQGEGASSEVVANIQRANQRDDLDVLIIGRGGGSIEDLWAFNEEAVVRAIFE
SRIPIISSVGHETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMS
NRLAYNRERLAKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMRDAYGQGANQLQGLRH
RLEATSPLHRIERYQDRLLQDKRILTNRMEQVLKEQKIKVQGLSEALLMLDTSRIIARGY
AMVKQDDQVLDSVAKVKEGDPLSLIMRDGQLEVEVKHVERKEI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgttttttggtataattaaacttgatcatattctgcagaaaggagttcctatgtccaac
tatttatccgtatcaagtttgaccaaatatttgaaattaaaatttgataaggatccctat
ttggaaagggtttatctgacagggcaggtctccaatttccgaaaacgtcccaaccaccag
tatttttcattaaaggatgaaaaagcggttattcaggcgacggtctgggctggggtttat
cgaagctttggttttgagctagaagaaggcatgaagatcaacgtcatcggtcgcattcag
ctttatgaaccaagtgggagttattccattgtcattgaaaaggctgagccagatggggta
ggggccttggccatccaatttgagcaactcaagaaaaagttgaccgaagaaggtctcttt
caggatcagtggaagcaagctctgccacagtttccaagaaagatcggggtcatcaccagt
caaagtggggccgtgatccgcgatattatcacaacggtgagccgacgcttccctggtgta
gagattgtgctctacccgaccaaggttcagggggaaggcgcatctagtgaggtggttgct
aatattcaaagggctaaccaacgggatgatttggatgtcttgattatcggtcgtgggggt
ggttcgattgaagacctctgggcctttaatgaagaagcggtggtgcgagccatctttgaa
tcgcggattccgattatctccagtgttggacatgagacagatacgactctagccgatttt
gtagcagaccgtcgagccgctactccgacagccgctgctgaattggccactccagtaacc
aagttggatctcttgtcccatttacaaaagcaggaaaatcgcatggcaacagctatgtcc
aatcgcttggcctataatcgtgaacgcttggccaaattaagtcaatcggttatttttaga
cagcctgaaagactctatgatggctacctgcaaaagattgaccagttgcaattacgatta
aaacaagggatgcgcgatgcttatggacaaggggcgaatcagctgcaaggtctgcgtcat
cgcctagaagctacgtctcctttgcatcgtattgagcgctaccaagatcgcctgctccaa
gataagagaatcttaaccaaccgaatggaacaagttttaaaagagcaaaaaatcaaggtg
caaggcttatcagaagctctcttgatgctcgatacgagtcggattattgcgcgtggctat
gccatggttaagcaagacgatcaggtcctagactcggttgcgaaagtaaaagaaggggac
ccgctatcactcatcatgagagatggccagttagaagtagaggtaaaacatgtcgaaaga
aaagaaatttga
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