Streptococcus parasanguinis ATCC 15912: HMPREF0833_10176
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Entry
HMPREF0833_10176 CDS
T01545
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03030
DNA replication
scp03430
Mismatch repair
scp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0833_10176 (holA)
03430 Mismatch repair
HMPREF0833_10176 (holA)
03440 Homologous recombination
HMPREF0833_10176 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scp03032
]
HMPREF0833_10176 (holA)
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10176 (holA)
Enzymes [BR:
scp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0833_10176 (holA)
DNA replication proteins [BR:
scp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0833_10176 (holA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0833_10176 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AEH55207
UniProt:
F8DFD2
LinkDB
All DBs
Position
174987..176021
Genome browser
AA seq
344 aa
AA seq
DB search
MQAITDTKHLTVQTLPPILVLTGEDVGQFEWLKKDILNKIGYDPSDLNYSYFDMKEASYD
EVELDLVSLPFFADEKIVILDHLLDVTTAKKRNLTDEDLKQFENYLENPSESTRLVIFAE
GKLDSKRRLVKLLKRDAQIIEATTPKEQEVKRYFASQAQELGLQFEGDSLDQLLLKSGYD
FGELQKNIALLQAYKEDGQITLEDIEEVVPKSLQDNIFDLTQMILKRQIDQARNLVKDLR
LQGEDEIKLIAILLGQFRMFSQVKIFSEEGQSESQIVASLSELSGRKVNPYQVKFALRDS
RRLSLSFLKQAMMTFIETDFAIKSGTYEKDYLFDLALLKVANSV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaattaccgacactaaacatctgacggttcaaactctgcctcctattcttgtc
ttgacaggagaggatgtaggtcaatttgaatggttaaaaaaagatattttaaataaaata
ggctatgatccttcagatttgaattattcttattttgatatgaaggaagcctcctatgat
gaggtcgagctggatttggtcagtcttcccttttttgcagatgaaaaaatcgtgattttg
gatcacttattggatgtgaccactgccaaaaaacgcaatttaacagatgaagatctaaag
caatttgaaaactatctggaaaatccttctgaatcgacccgtttggtgatatttgcagaa
ggaaaattagatagtaagcgccgcttggtcaaactcctaaaacgggatgcccaaatcatt
gaagcgacaacgcctaaagagcaagaggtaaaacgttattttgcaagtcaggcccaagaa
ttgggcttgcagtttgagggcgattccttggaccagctactcttaaaatctggctatgat
tttggagagttacagaagaatatcgctctactgcaggcttataaagaagatggtcagatt
accctcgaagatatcgaggaggttgttccaaagtccttgcaagataatatttttgatctg
acacaaatgattctcaaacgccaaatcgatcaagcccggaatttggtgaaggatctccgc
ttacaaggagaagatgagataaaattgatcgctattctgttggggcaattccgaatgttt
tctcaagttaaaattttctcagaagaaggccaatccgaaagccaaattgtagcgagcttg
tcggagttgtcaggacgcaaggtcaatccttaccaggtgaagtttgccttacgggatagc
cgcaggctttccctgtcctttttgaagcaggctatgatgactttcatcgagacggatttt
gcgattaaaagtggaacatatgaaaaagactacttatttgatttggccctgttgaaagta
gcgaatagcgtctaa
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