Streptococcus parasanguinis ATCC 15912: HMPREF0833_10248
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Entry
HMPREF0833_10248 CDS
T01545
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03030
DNA replication
scp03430
Mismatch repair
scp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0833_10248
03430 Mismatch repair
HMPREF0833_10248
03440 Homologous recombination
HMPREF0833_10248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scp03032
]
HMPREF0833_10248
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10248
Enzymes [BR:
scp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0833_10248
DNA replication proteins [BR:
scp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0833_10248
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0833_10248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEH55279
UniProt:
F8DFR9
LinkDB
All DBs
Position
255980..259099
Genome browser
AA seq
1039 aa
AA seq
DB search
MREEKTVIVQLDTKTVYTFMESLVTIKDYVQVAKSMGYDALGIMDVDNLYGAYEFIEACQ
AHNLSPLVGLEVGLEVDNETIPFRMIALSTRGYQNLMKMSTLKMMGKNNWEDVKHLTEGV
AVIVPAPFASEDLPLGLDYFIGVFADTPVQEFSHPVLPLYTVRFFEEEDVEAMQMLAAIK
DNQSLTETGPNDPRTVLKTPQDLKNDFAERFPQAITNLEKLVQGIQYDIDTQLKLPRFNS
QKPAVEELRELAQAGLLRKNLTNPVYQERLEHELDIIHQMGFDDYFLIVWDLLRFGRSQG
YYMGMGRGSAVGSLVAYALEITGIDPVEKNLLFERFLNVERYTMPDIDIDIPDIYRPEFI
RYVRDRYGSYHAAQIVTFSTFGAKQAIRDVFKRFGVPEYELTSITKRIGFRDTLTTAYEQ
NLAFRQVIHSRAEFKRGFEIAKRIEGQPRQTSIHAAGVVMSDQDLTDHVPLKYGEDMFVT
QYDAHAVEANGLLKMDFLGLRNLTFVQKMKEAVYEKYQEEIVIEAIDLEDPATLALFAAG
DTKGIFQFEQAGAIRLLRRVRPNHFEEVVATTSLNRPGASDYIDNFVKRKHGQEKVDILD
PAIEEILRPTYGIMLYQEQVMQVAQRFAGFTLGKADILRRAMGKKNATEMHKMEDDFVTG
ALKLGHTEEKAKEVFAIMEKFAGYGFNRSHAYAYSALAFQMAYFKVHYPDVFFDVMLNYS
SSDYLTDALQFDFKVAPLSINTIPYRDKFQDRKIYLGMKNIKGLPRDLAYWIIDNRPFES
VEDFILRLPNQYHKLPLLTPLVELGLFDNFEKNRRKVLHNLPNLFVFADELGSLFADSNY
SWTEAEDYSQAEKYEKEEAIIGIGLSTHPLVAIGQTSPYEIQPISQLIQGEQARILIEVQ
SIRTIRTKSGDLMAFLQVSDTKKKLDVTLFPETYNRFSSLIKEGGFYYLTGKVQERDGRL
QMILAEAQLATNEKFWIQLLDHRQDQTILSILKKYPGPYPVVLRYEDEKKTLQLKGYTVQ
KNKELEDELKILVMKTIYR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaggagaaaacagtgattgtacagctagataccaaaacagtctatacctttatg
gaaagcctagtgaccataaaagactatgtccaagtggctaaaagcatgggttatgatgca
ttgggaatcatggatgtagataatttgtatggtgcttatgaatttatcgaagcctgtcag
gcccacaacctcagccccttggtcggtttagaagttggactagaggtagacaatgaaaca
attccgtttcggatgattgccctgtcaacgaggggttaccagaatctgatgaaaatgtcg
accctcaaaatgatggggaaaaacaattgggaggatgtgaagcaccttacagaaggagta
gcagtcattgtcccagcgccttttgccagtgaagacttgccgcttggtctagattacttc
atcggagtttttgccgatacgccggtccaagagtttagccaccctgtgctccctctttat
actgtgcgtttttttgaggaggaagatgtggaagccatgcagatgctggcagccatcaag
gacaatcaaagcttgacggaaacagggccaaatgatcctagaactgtcctaaaaaccccg
caggatttaaagaatgattttgcagagcgatttcctcaagctatcacaaatctggaaaaa
cttgtccaaggaattcaatacgacattgatactcagttgaaattacctcgcttcaattct
cagaaaccagctgttgaggaactgagagaattagcccaagctggtcttcttcgaaagaac
ttgaccaatcctgtctatcaagaacgtctggagcatgaattagacattattcaccaaatg
ggctttgatgattattttttgattgtctgggaccttcttcgtttcggacggagtcaaggc
tattatatgggaatgggacgtgggtctgctgtgggctcactggtagcctatgccctagag
attacagggattgatcctgtggagaagaacctcctgtttgagcgctttttaaatgtggag
cgctacaccatgccggatattgatattgatattcctgatatttatcgtccagaatttatc
cgctatgtgagagaccgttacgggagttaccatgcggctcagatcgtgaccttttcaacc
tttggagccaaacaagccattcgagatgtctttaaacgttttggagtaccagagtacgaa
ttaacctccattaccaagcggattggctttagggatacactgacgacagcttatgaacag
aatctagcttttcgacaagtgattcatagtcgagcagaatttaaacgtggctttgaaatt
gccaaaagaatagaaggccaacctagacaaacctcgatccacgcggcgggtgttgtgatg
agtgatcaggatttgacggatcacgttcctctcaagtacggagaagatatgtttgtcacc
cagtatgatgcccatgcggttgaagccaatggtctgttgaagatggactttttgggtctg
cgaaatttaacctttgttcagaaaatgaaggaagcagtttatgaaaagtaccaagaagag
atcgtgattgaagccattgatttagaagatccagcaaccttggccttgtttgctgctggg
gataccaaggggattttccaatttgaacaggctggagctatccgccttttgagacgtgtg
agacccaatcatttcgaagaagtggtagcgaccacctctctcaatcgtccaggagctagt
gattacattgataattttgtcaaaagaaagcacggccaggaaaaagttgacattctggat
ccagctattgaagaaatcttacggcccacttatgggatcatgctttaccaagagcaggtc
atgcaggttgcccagcgttttgcaggctttaccctagggaaagccgatattttacgtcgg
gccatgggcaaaaaaaatgcaactgaaatgcacaagatggaggacgattttgtcacgggt
gctcttaaacttggtcatacggaagaaaaagccaaagaggtctttgcaatcatggaaaaa
ttcgcaggctatgggtttaaccgttcccatgcctatgcctattctgccttggcctttcag
atggcctatttcaaggttcattatccagatgttttctttgatgtcatgctcaattattcg
agcagcgattatctgacagatgctctccagtttgattttaaagtcgcgccattatccatc
aataccatcccttacagagataagtttcaggatcgaaaaatttacttgggaatgaaaaat
atcaagggacttccaagagatttagcgtattggatcattgacaatcgtccctttgaaagt
gtcgaagattttattttacgccttcctaatcagtatcataaattacctctgttgacgcct
ttagtagaactagggttgtttgataactttgagaagaatagacgcaaggtgcttcacaat
ttgccgaatttatttgtctttgcagatgagctaggcagtttgtttgcggattctaactac
tcctggacagaggcagaggactatagtcaggctgaaaaatatgagaaggaagaggccatt
attggcatcgggctcagtacccacccattggttgcgattgggcaaacgagtccctacgag
atccaaccaatttctcaactcatacaaggagagcaggcacgcattctcattgaggtacaa
agcattcgaactattcgaaccaagtcgggagatctcatggctttcttacaagtcagtgat
accaagaaaaaactggatgtgacccttttccctgaaacctataatcgattttcctccttg
ataaaagaaggtggcttttattacttgacggggaaggtacaggagcgtgatgggcgctta
cagatgattctagcagaggctcaactagctactaatgagaaattctggattcagttgctc
gatcatcgtcaggatcaaacgattctttctatcttgaaaaaatatccagggccatatcct
gtggtattacgctatgaagatgagaaaaaaactcttcaattgaagggctatacagttcag
aaaaacaaagaattggaagatgaactaaagattctcgttatgaaaacgatttatcggtaa
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