Streptococcus parasanguinis ATCC 15912: HMPREF0833_10256
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Entry
HMPREF0833_10256 CDS
T01545
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03420
Nucleotide excision repair
scp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0833_10256 (pcrA)
03430 Mismatch repair
HMPREF0833_10256 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10256 (pcrA)
Enzymes [BR:
scp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0833_10256 (pcrA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0833_10256 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HMPREF0833_10256 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
AEH55287
UniProt:
F8DFS6
LinkDB
All DBs
Position
266350..268653
Genome browser
AA seq
767 aa
AA seq
DB search
MNGENEMNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWN
ILAITFTNKAAREMKERAYQLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPG
EQRTLMKRILKSLNLDPKKWNERTILGTISNAKNDLIDEVAYAAQAGDIYTQIVAKCYEA
YQKELRQSEAVDFDDLIMLTLRLFDQHPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLL
ASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKTILQAANDV
IKNNRHRRPKNLWTQNEDGEEIVYYRANDEQDEAVFVAKTIEELSREAGYKHRDFAVLYR
TNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVIAYLNLIANLSDNISFERIINEPK
RGIGPGTVDKIRDFAQMQEASLLDASANIMLSGIKGKAAQAIWDFANLILDLRERLDQLT
ITELVEEVLDKTGYMMALTNQGNLESQARIENIQEFLSVTKNFDENGETVEDETGVETLS
RFLNDLALIADTDDGAQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDPDEL
EEERRLAYVGITRAEKVLFLTNANSRLLFGRTSYNRPTRFINEISSDLLTYQGLARPANT
SFKASYSNGGGTTFGKGMSLSQALQERKRQAAPSALTSSSLPFGNSNRAGAKETVAWSIG
DIAIHKKWGEGTVLEVSGSGNTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggagaatgagatgaatcctttattgaatggtatgaatgatcgccaagcagag
gcggtccaaacgacagaaggtcccctcttgatcatggcgggggctggttctggtaagaca
cgtgtcttgacccatcgcatcgcttacttgatcgatgaaaaaatggtcaatccttggaat
attttggccattacctttaccaataaagccgctcgggagatgaaggagcgggcttatcag
ttaaatccagcgactcaagattgcttgattgccaccttccactccatgtgtgtgcgtatc
ctccgtcgagatgcggatcacattggctacaatcgaaattttaccattgtcgatccaggt
gagcaacggaccttgatgaagcgcatcttgaagtctttgaatttggatcctaagaaatgg
aatgaacggaccattttgggaactatttccaatgccaaaaatgacttgatcgatgaagtg
gcctatgccgcccaggctggagatatatatacccagatcgtcgccaagtgttatgaggct
taccaaaaggaactccgtcagtcagaagcagtggactttgatgatttgatcatgctgacc
ttgcgtctttttgatcagcatcctgatgtgctgacctattaccagcagaagttccaatac
atccatgtagatgagtaccaagataccaaccatgcccaataccaattggtcaaactcttg
gcttctcgctttaaaaatatctgtgttgttggggatgctgaccagtctatttatggctgg
cggggagcggatatgcaaaacatcctagactttgaaaaggattatcccgatgccaaggtc
gttttgttagaggaaaattaccgctcgactaagacgattttgcaagcagccaatgatgtc
atcaaaaacaatcgccaccgccgtccgaagaatctctggacacaaaatgaagacggggaa
gagattgtctattaccgggctaatgacgagcaggatgaagcagtctttgttgctaaaacc
attgaagagcttagtcgcgaagctggctacaaacaccgtgattttgctgttctataccgg
acaaatgcccagtcacggaccattgaagaagccttactcaagtccaacattccctacacc
atggtagggggcaccaagttctacagccggaaggaaattcgggatgtcattgcttatctg
aacttgattgctaacctcagtgacaatatcagttttgagcgcattatcaatgaacctaag
cggggaatcgggccgggtacagtggataagattcgcgattttgcccaaatgcaagaggct
tcgctcctggatgcttcggctaatatcatgctctcaggtatcaaaggaaaggcagcccag
gctatctgggattttgccaatctcattcttgatttgcgagaaagattggaccagctgaca
attacagagttggtcgaagaagtccttgataagacaggttacatgatggccctaaccaat
caggggaatttagaaagtcaggcccgcatcgagaatatccaagagttcctgtctgttacc
aagaattttgatgaaaacggggaaaccgtcgaagacgaaacaggtgtggaaaccttgagt
cgtttcttgaatgatttggctttgattgccgatacagacgatggagcgcaagagacctca
gaagtgaccttgatgacccttcacgcggccaaaggtttggaattcccagtggtcttcttg
attgggatggaagaaaacgtctttcctcttagtcgtgcagcagaggatccagatgagttg
gaagaagagcgtcgtttggcttacgtggggatcacgcgggcagagaaggttctcttcttg
accaatgccaattctcgtttgctctttgggcggaccagctacaaccgtccgacgcgcttt
atcaatgaaattagctcagatttgttaacctaccaaggattagcgcgtccggccaacaca
agctttaaggcttcttatagcaatggtggcggaacgacctttggaaaaggcatgagtctg
tcacaagcccttcaagagcgcaagagacaagcagctccaagtgccctcacgtcatcaagc
ctaccctttggcaatagtaaccgagcgggtgccaaagaaaccgtcgcttggtctattggc
gacattgccattcacaagaagtggggcgaaggaactgtgcttgaagtctctggtagtggc
aacacccaagaactcaagatcaacttcccagaagtgggtctcaaaaaactcttggcaagt
gtcgcgccgattgagaagaaataa
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integrated database retrieval system
