Streptococcus parasanguinis ATCC 15912: HMPREF0833_10261
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Entry
HMPREF0833_10261 CDS
T01545
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scp03016
]
HMPREF0833_10261 (truB)
Enzymes [BR:
scp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0833_10261 (truB)
Transfer RNA biogenesis [BR:
scp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0833_10261 (truB)
Prokaryotic type
HMPREF0833_10261 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AEH55292
UniProt:
F8DIS2
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All DBs
Position
273230..274126
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AA seq
298 aa
AA seq
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MDGIINVKKEAGMTSHDVVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQ
DEGKIYEGEITLGFSTTTEDASGEIVERTPVEAPLDAAEVDSTIAQMVGEIKQVPPMYSA
VKVNGRKLYEYARAGEEVERPVRQVTIYDFTRTSEISYEEGLARFRFRVKCSKGTYIRTL
SVDLGQQLGYAAHMSHLTRTSAAGLLLDDALTLEEVAEKVSQGDLSFLHPLEIGTGDLEK
VELIVEEVGEVQVGRFIPVESDSKELAAFYQGKLVAILEKREELYKPRKVFLTESVLQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattattaatgtaaaaaaagaagcagggatgacttcacatgatgtggtcttt
aaactgcgaaaaatcctaggtactaagaagattggccatggaggaactctggacccggat
gtggtgggggtacttccgattgccgtaggaaaggcgactcggatggttgaatttatgcag
gatgagggtaaaatctacgagggagaaatcactttgggattttctaccacgacggaagat
gccagcggggaaatcgttgagcggacgccagtagaagcccctttagatgcagcagaggta
gacagtacgattgcccaaatggtaggagaaatcaagcaagtaccacccatgtattcagcg
gtcaaggtcaatgggcgcaagctctatgaatatgcgagggcaggagaagaagtggaacgc
cctgtccgacaagtgaccatttatgactttacgcgcaccagtgagattagctatgaagaa
ggtctagcccgttttcgtttccgagtcaaatgcagcaagggcacctatatccggaccttg
tcggtggatctgggacaacaattgggttatgcagcccacatgtctcatctgacacgaacc
agtgctgccggtttgttactggatgatgccctgaccttggaagaagtggcagaaaaagta
tctcaaggagatttgagcttcctccacccacttgaaattggaaccggggatcttgaaaaa
gtagagctgatagtcgaagaggttggcgaagtccaagtgggacgctttattccagttgag
agtgactccaaagaattagctgctttttaccaaggaaaattggtagctattttagaaaaa
agagaagaactttacaaacctcgcaaagtttttctaacagaaagtgtgttacaataa
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