Streptococcus parasanguinis ATCC 15912: HMPREF0833_10775
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Entry
HMPREF0833_10775 CDS
T01545
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp00521
Streptomycin biosynthesis
scp00523
Polyketide sugar unit biosynthesis
scp00525
Acarbose and validamycin biosynthesis
scp00541
Biosynthesis of various nucleotide sugars
scp01100
Metabolic pathways
scp01110
Biosynthesis of secondary metabolites
scp01250
Biosynthesis of nucleotide sugars
Module
scp_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HMPREF0833_10775 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HMPREF0833_10775 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HMPREF0833_10775 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HMPREF0833_10775 (rfbB)
00525 Acarbose and validamycin biosynthesis
HMPREF0833_10775 (rfbB)
Enzymes [BR:
scp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HMPREF0833_10775 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AEH55806
UniProt:
F8DIF7
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Position
complement(798744..799790)
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AA seq
348 aa
AA seq
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MSEYKHIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEILGDRVELVV
GDIADAELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAARKYDIRF
HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFG
VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAI
LTKGRIGETYLIGADGEKNNKEVLELILEKMGQPKDAYDRVTDRAGHDLRYAIDSTKLRE
ELGWEPQFTNFEAGLEDTIKWYTDHQDWWKAEKEAVEANYAKTQKVLK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatataaacatatcatcgtaaccggtggagctggtttcatcggttcaaacttc
gtacactatgtctacaacaaccatccagacgtgcatgtgactgtcttggacaaacttact
tatgctggtaaccgtgccaatatcgaagaaatccttggagatcgtgttgagttggtggtg
ggagacatcgctgatgctgaattagttgacaaattggctgccaaggctgatgctattgtt
cactatgcggctgaaagccacaatgacaactccctcaaagacccatctccatttatctac
acaaactttgttggaacttatacactcttggaagctgctcgtaaatacgacattcgtttc
caccatgtgtcaacagacgaagtgtatggagaccttccattgcgcgaagatcttcctgga
catggggaaggtcctggtgaaaaattcactgctgaaaccaaatacaacccatcatcacct
tattcatcaactaaggctgcttcagacttgattgtgaaagcttgggtacgttcctttggt
gttaaggcaactatttcaaactgttcaaacaactacgggccataccaacacatcgaaaaa
ttcatcccacgtcaaatcaccaatatcttgtctggcatcaagccaaaactttatggtgaa
gggaagaacgtccgtgactggatccacaccaacgaccactcaactggtgtttgggctatc
ctcactaagggccgtatcggtgaaacttacctgatcggtgccgatggtgaaaagaacaac
aaagaagtgcttgagctcatccttgaaaaaatgggtcaaccaaaagacgcctacgaccgt
gtaacagaccgtgctggtcacgatttgcgttacgccatcgattcaacaaaattgcgtgaa
gaattaggttgggaaccacaattcacaaacttcgaagcaggtttggaagataccatcaag
tggtacacagaccatcaagactggtggaaggctgaaaaagaagctgtagaagctaactac
gcgaaaacacaaaaagttttgaaataa
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