Streptococcus parasanguinis ATCC 15912: HMPREF0833_10801
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Entry
HMPREF0833_10801 CDS
T01545
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10801 (addA)
Enzymes [BR:
scp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0833_10801 (addA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HMPREF0833_10801 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
DUF2059
AAA_7
AAA_30
AAA_16
ResIII
GST_N_2
PIF1
Motif
Other DBs
NCBI-ProteinID:
AEH55832
UniProt:
F8DJ39
LinkDB
All DBs
Position
complement(823063..826728)
Genome browser
AA seq
1221 aa
AA seq
DB search
MIKQAFLTREEIKALQAQEAASNKEQKRTPEQIDAIYSSGTNILVSASAGSGKTFVMVQR
ILDQMQRGISIKELFISTFTVKAAGELKERLESELGKALQASDDPELKQHLARQIADVAT
SDIGTMDSFTQKVLTRYGYLLGLAPQFRILQNASEQRLLQNEVFQAVFDRYYQGENQEAF
VQMVKNFTGQRKNLTLFKEQVYQIYDFLQSTSDPEKWLEEHFLKGYEETDFDQVEGDLME
SIQQALYEAESFFAFHLSNEGQAFGKAKYLEAVEEVLDQIGSLTGPTNKEQVTSVLKAVV
AISRASNGGALTNRARKEELKELVTAYNQDKTIHINRLRDLENQLYQLEFQQTFHQEEGP
MLSLLRDFIRDFARAYLERKIQEKAYEFGDISHFAIQILEQFPEVRQAYQERYHEIMVDE
YQDTNHTQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPQIFNDKFKAYQEEGAKGRLIL
LKENFRSHVEVLDATNDVFRHLMDEEVGEIDYNQTHYLVAGSDKQRMALLQHRAEFLLYD
GSQDQEEKTEDEEAASGLETVSKGEILLVIKEILRLHRVEKVPFKEITLLTATRTRNDAI
LEAFDQYRIPIVADSGQAHYLESLEVMVMLDTLRTINNPLHDYALVALMKSPMFDFDEDE
LARISLQTFPEQKQLPFYHKVQLAIEKTAEHANLIDAKLSAKIKNFLKFLSTWRAAAKTS
SLYDLLWKIYEDRYYYDYVGALPNGVQRQANLYALTLRANDYEKASFKGLSRFIAMIDKV
IENEHDLASVPLAAPKDAVQLMTVHKSKGLEFKYVFILNMDKAFNRKDQSGPIILSRQKG
IGFKYIANLPVETENPAAPESIRLQIETPCYQRNVEETKLATISEQMRLLYVAMTRAELK
LYLVGKGWEDKLRDTDWGTSRNGKLDPEKRKEWTSYQDWLFAIQDVFTKNTLAYDTRFVT
DEDLTPDQLEPLEKEKDSRFDQLKDIRQSEDIRRALDILENVDRLNQLYAPAIHLPSVRT
PSQIKKFYEPVMDANGVQIMDAKLVVPKFELPTFGQEKAVTGAQVGSAVHELMQRVPLEE
EITLDTLRQALEQVQAEPAVKARIKLEAILAFYETPLGTLLQKEASRVRREAPFAMLKKD
PASGEDFVVRGILDGYVVLEDRILLFDYKTDHYEVPSQLVERYRDQLDLYAEALRRSYGK
EQVEKYLVLLGGPHLEVVKVE
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaagcatttttgacaagagaagaaatcaaggcccttcaggcccaagaggca
gcctctaataaagagcaaaagcggacacctgaacagatcgatgccatctatagttcgggg
accaatatcctggtgtcggcctctgctggatcaggaaagacctttgtcatggtgcagcgg
atactggatcagatgcagcgtggcatttcgattaaggagctctttatttcgacctttacg
gtcaaggcagcaggtgagctcaaggagcgtttggaaagtgaacttggaaaagccctgcaa
gcgagcgatgatccagagctcaagcaacacctggcccgtcaaatcgcagatgtcgccacc
agcgatatcggaaccatggactcctttacccaaaaggtcctgacgcgctatggctatttg
cttgggttggcacctcagtttcgcattttacaaaatgctagtgagcaacgcctcttacaa
aatgaagtctttcaagctgtttttgatcgctattaccagggggaaaaccaagaagccttt
gtgcagatggtcaagaatttcaccggccagcgcaaaaatttgaccttgtttaaagaacag
gtctaccagatctatgactttcttcagtcgaccagtgatccggagaaatggctggaggag
catttcctaaaaggctatgaggagactgattttgaccaggttgaaggcgatctgatggag
agcatccagcaggccctttatgaagcagaaagcttttttgcctttcatttgtccaatgaa
ggccaagcatttggcaaggcaaagtatttggaagctgtagaagaggtgctcgatcagatt
ggaagcctgacaggtcccaccaataaagaacaagtgacctctgtcctaaaggcagtcgtg
gcgattagccgggcttcaaatgggggagccttgaccaatagagcccgtaaggaagagttg
aaagagttagttacggcttataaccaggataaaaccatacatatcaatcgcctcagagac
ttggaaaatcagctctatcagctggaatttcaacaaaccttccaccaagaagaaggcccc
atgctctccttgctccgggactttattagagactttgctcgcgcttatctggagcgaaaa
atccaagaaaaagcttatgaatttggggatatcagtcattttgcgattcaaattttagag
caattcccagaggtgagacaagcctatcaagagcgctatcatgagatcatggtcgatgag
taccaggataccaaccacacccaagagcggatgttggacttgctgtcaaatggccacaat
cgcttcatggtgggggatatcaagcaatcgatttaccgcttccgtcaggcagatccacag
attttcaatgataaatttaaggcctaccaagaagaaggggcgaaagggcggttgatcctc
ctcaaggaaaatttccgaagtcatgtggaggtgttggacgcgaccaatgatgtctttcgc
catttgatggacgaagaggtgggcgagattgactacaatcaaacccactatctggtcgca
ggaagtgacaagcagcggatggccttgctacaacatcgggcagaatttttgctctatgat
ggctcccaagaccaggaagaaaagaccgaagacgaggaagctgcttctggactcgagacg
gtttccaagggagaaattctcctagtcatcaaagaaattttacgcctccatcgggtggaa
aaagtgccttttaaagagatcacgctcttgaccgcgactcgaactcgaaatgacgcgatt
ctggaagcctttgaccagtatcgtatcccgattgtggcagatagtggacaggcgcattat
cttgagtcactggaagtgatggtcatgttggataccttgcggaccattaacaatcccttg
cacgattatgccttggttgctctcatgaaatcacctatgtttgactttgatgaagatgaa
ttggcacggatttctttgcagacctttccagagcaaaagcaactgcccttctaccacaag
gtccagttagccatcgaaaagaccgcggagcatgcaaatctgatcgatgccaagctttca
gctaaaatcaagaacttcctcaaatttttatctacttggcgggctgctgccaagacctct
tcgctctatgatttgctgtggaaaatttatgaggatcgctattactatgactatgttggc
gcccttccaaatggggtccagcgccaggccaatctctatgccttgacgcttcgggccaat
gattatgaaaaagccagctttaagggcttgtcgcgcttcattgccatgattgataaggtg
attgaaaatgaacacgatttggccagcgtccctcttgcggcgccaaaagatgccgtccag
ctcatgaccgtccataagagtaaagggctggaattcaagtatgtctttattctcaatatg
gacaaggcctttaaccgtaaggatcaatcggggccgattatcctcagtcgtcaaaaaggg
attggctttaaatacattgcgaacctgccggttgagacagagaatcctgctgctccagaa
tccattcgcctgcagatcgaaacgccttgctaccaacgcaatgtggaagaaacaaaattg
gccacaatttctgagcagatgcgtcttctttatgtcgctatgacacgggccgagctcaag
ctctatctggtcggaaaaggctgggaggacaaactgcgtgataccgattggggaaccagt
cgcaatggcaagctagatccagagaagcgaaaagaatggacctcttatcaggactggctc
tttgccattcaagatgtgtttaccaagaataccctggcctatgacacgcgttttgtgaca
gacgaagacctgacaccagaccagctggagccactagagaaggagaaggattcccgcttc
gatcagctcaaggatatccgtcagtcagaggatattcgtcgggccttggatatcttggaa
aatgttgatcggctcaatcagctctatgctccggccattcatttaccaagtgtccgtact
ccaagtcagatcaagaaattctacgagccggtcatggatgccaatggcgtccagatcatg
gatgcaaagctagttgtgcctaagtttgagcttccaacttttggtcaagaaaaagccgtg
acaggagcccaggtcggtagtgctgtccatgaactcatgcagcgcgtgcctcttgaagaa
gaaatcacgctggatacgctgcgtcaagccttggagcaagtccaagcagagccagcggtc
aaagcccgcatcaagctagaggccatccttgctttttatgagacacctttggggaccttg
cttcaaaaagaagcctctcgagtccgtcgcgaagctccttttgccatgctgaagaaagat
ccagccagtggagaggactttgtcgtgcgggggatcttggatggttacgtggtgctagaa
gaccggatcctgctctttgattataagacagatcactacgaggttcctagccaattggtc
gaacgttaccgggatcagctcgatctctatgcagaagctcttcgtcgttcttatggcaaa
gagcaagtagaaaaatacctcgtgcttctaggtggcccccatctagaagtggtgaaagtg
gagtaa
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integrated database retrieval system
