Streptococcus parasanguinis ATCC 15912: HMPREF0833_10926
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Entry
HMPREF0833_10926 CDS
T01545
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0833_10926 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_10926 (mutM)
Enzymes [BR:
scp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HMPREF0833_10926 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF0833_10926 (mutM)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0833_10926 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Auto_anti-p27
Zn_ribbon_6
DZR
HscB_4_cys
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AEH55957
UniProt:
F8DJ56
LinkDB
All DBs
Position
complement(958987..959811)
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AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDLDAFRQDLPGQEIRVLGRRGKYL
LFYLTDLVLISHLRMEGKYFFYPDEVPFRKHAHIFFHFTDGSTMVYEDVRKFGTMEVLVP
EFIDSYFLTKKIGPEPTEADFKEQAFQAALKKSKKPIKSALLDQKLVAGLGNIYVDEVLY
RAKVHPARLGQSLTAREAKAIRKETIAVLAQAVEKGGSTIRSYSNAFGEDGTMQEEHQVY
GKTGQPCLRCGTPIEKIQLGGRGTHFCPHCQKEN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgagaccgttcggcgtggtcttgagaaattaattcttggg
aagaccatccaatcagtggaagtaaagtatccaaagatgattcagacggatctggatgct
tttcgtcaagatctcccaggtcaagaaattcgggtcctggggcgtcgcgggaaatacctc
ttgttttatttgacggatttggttttgatctcgcatttgcggatggaaggcaagtatttc
ttttatccagacgaagtcccttttcgcaagcacgcccatatcttctttcactttacagat
ggcagcaccatggtctatgaagatgtccgcaagtttgggaccatggaagtcttagtgcct
gagtttatagacagctattttttgacgaaaaaaattggtccagagccaacagaagcggat
tttaaagaacaagccttccaagcagctcttaaaaaatcaaagaaacccattaaatcagct
cttttagaccaaaaattagtggctggtctgggcaatatctatgtagatgaggtcctttat
cgagccaaggttcatccagctcgtttgggtcaaagcttgactgctagagaagccaaagcc
atccgaaaggaaacaatcgctgtgcttgctcaggctgtcgaaaaaggtggctccactatt
cgctcctacagcaatgcttttggagaggatggcactatgcaggaagagcatcaagtctat
gggaaaacaggtcagccttgtttgcgctgcgggacaccgattgagaaaatccagctggga
ggacgtggaacccatttttgcccgcactgtcaaaaggagaactag
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