Streptococcus parasanguinis ATCC 15912: HMPREF0833_11271
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Entry
HMPREF0833_11271 CDS
T01545
Name
(GenBank) HD domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scp03019
]
HMPREF0833_11271
Messenger RNA biogenesis [BR:
scp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0833_11271
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AEH56302
UniProt:
F8DJP1
LinkDB
All DBs
Position
complement(1327764..1328723)
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AA seq
319 aa
AA seq
DB search
MEKMMVKINQMKKDELFEGFYLIKSAEVRQTRAGKNYLAFVFQDETGTIEGKLWDAQPHN
VESFTAGRVVHMAGRREVYNNTPQVNQLNMRLPQAGEPNNPADFKEKPPVDPKELHEYLS
NMIFKIENPVWQRIVRALYGKYEKEFYSYPAAKTNHHAFEAGLAYHTATMVRLADSIGDI
YPQLNKSLLFAGIMLHDLAKVIELTGPENTEYTVRGNLIGHIALIDEEITKVLQDLKIDD
QKEEVIVLRHVILSHHGLLEYGSPVRPKIMEAEIIHMIDNLDAEMMMMTTALGLVGPGEM
TNKIFAMENRSFYKPNIDQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgatggtcaaaattaaccaaatgaaaaaagatgaattgttcgaaggattc
tatttgatcaagtcagcagaagtgcgtcaaacgcgggctgggaagaactatctagccttt
gtttttcaggatgagaccggcacgatcgaaggcaaactatgggatgcccaaccacacaat
gtagagagctttacagctgggcgcgtggtccatatggctggtcgtcgggaggtctacaat
aatactccacaagttaatcaattgaatatgcgcttgccacaagcaggagagcccaacaat
ccagcagacttcaaggaaaaaccaccagtagatcccaaggaattgcatgaatacctgtca
aacatgattttcaaaattgaaaatccagtttggcaacggattgtccgtgccctctatgga
aaatatgagaaagagttttatagctatccagctgctaagaccaaccatcatgcctttgaa
gcaggtctcgcttatcatacagcgaccatggtccgcttggcagatagtatcggcgatatc
tatcctcaattgaataagagtttgctctttgcagggattatgttacacgatttggctaaa
gtgatcgagttgacgggtcctgaaaatacagaatacactgttcggggcaatctcattggt
cacattgctttgatagatgaagaaatcaccaaagtcttgcaagacttgaagattgatgac
caaaaagaagaggtaattgtccttcgccatgtgatcttgagtcaccatggattactcgaa
tacggtagtcctgttcgtccaaagatcatggaagcagagattattcatatgatcgacaat
ttggatgcagaaatgatgatgatgacaacagctctaggtttggttggtcctggcgagatg
accaacaagattttcgctatggaaaaccgatctttctataaaccgaatatcgatcagtaa
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