Streptococcus parasanguinis ATCC 15912: HMPREF0833_11685
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Entry
HMPREF0833_11685 CDS
T01545
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0833_11685 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scp03019
]
HMPREF0833_11685 (groL)
03110 Chaperones and folding catalysts [BR:
scp03110
]
HMPREF0833_11685 (groL)
03029 Mitochondrial biogenesis [BR:
scp03029
]
HMPREF0833_11685 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scp04147
]
HMPREF0833_11685 (groL)
Enzymes [BR:
scp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0833_11685 (groL)
Messenger RNA biogenesis [BR:
scp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0833_11685 (groL)
Chaperones and folding catalysts [BR:
scp03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0833_11685 (groL)
Mitochondrial biogenesis [BR:
scp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0833_11685 (groL)
Exosome [BR:
scp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0833_11685 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0833_11685 (groL)
Exosomal proteins of breast cancer cells
HMPREF0833_11685 (groL)
Exosomal proteins of colorectal cancer cells
HMPREF0833_11685 (groL)
Exosomal proteins of bladder cancer cells
HMPREF0833_11685 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
AEH56716
UniProt:
F8DH20
LinkDB
All DBs
Position
1805932..1807557
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSSDARSAMVRGVDVLADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIE
TAVATAVEALKNNAIPVSSKEAIAQVAAVSSRSEKVGEYISEAMEKVGKDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILITDKKISNIQEILPLLESILQ
SNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
DDLGLELKDATIEALGQAAKVSVDKDSTVIVEGSGNPEAIANRVAVIKSQIETTTSEFDR
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV
ISAVATLELEGDEATGRNIVLRALEEPVRQIAHNAGYEGSIVIDRLKNAEVGTGFNAATG
EWVNMIDAGIIDPVKVSRSALQNAASVASLILTTEAVVANKPEPVAPAGPGMDPSMMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcatctgatgcacgttctgcaatggtccgtggtgtcgat
gtcttagcagatacagtgaaagttacgttgggccctaaaggacgcaatgtggttcttgaa
aaatcatttggttcacccttgatcacaaatgatggggtgaccatcgcaaaagaaatcgaa
ttggaagaccattttgaaaatatgggtgccaaattggtgtcagaagtggcttctaagacc
aatgatatcgcaggtgacggtacaacgaccgcaacggttttgactcaagccatcgtccgt
gaagggatcaaaaacgtcactgcaggtgctaacccaattggcatccgccgtgggattgag
accgctgttgcaacagcagtagaagctttgaaaaacaatgcgatcccagtatcgagcaag
gaagcgattgctcaagtagctgctgtgtcttctcgttctgaaaaagttggtgagtacatc
tctgaagccatggaaaaagttggtaaagatggagtcatcacgattgaagagtctcgtgga
atggagacagaactggaagtcgttgaaggtatgcaatttgaccgtggttacctctcacaa
tacatggtcactgataatgaaaaaatggtggcagaccttgaaaatccatacattttgatc
actgacaagaagatttcaaatatccaagaaatcttgccattgttggaaagcattcttcaa
agcaaccgtccactcttgatcatcgcagatgatgtcgatggcgaagctcttccaacactt
gtcttgaacaagatccgcggtacctttaatgtcgtagctgtcaaggcaccaggatttgga
gatcgccgcaaagccatgctagaagatattgccatcttgacaggtggtacagtcattaca
gacgatcttggtttggaattgaaagatgcaaccattgaagcacttggtcaagcagctaaa
gtttcagtcgataaagacagcacggtcattgtcgaaggttctggtaacccagaagcgatc
gctaaccgtgtcgctgttatcaagtcacaaatcgaaaccacaacctctgaatttgaccgt
gaaaaattacaagaacgtttggccaaattgtctggtggtgttgccgtgatcaaggtcggt
gctgcaacagaaacagaattgaaagaaatgaaactccgtatcgaagatgcccttaatgcg
actcgcgcagccgttgaagaagggatcgttgccggaggtggtacagctcttgtcaatgtc
atctctgcagtcgcaacccttgaattggaaggggatgaagcgaccggacgcaatatcgtt
cttcgtgctttggaagagccagtgcgccaaattgcccacaatgccggttacgaaggatct
attgtgattgatcgcttgaaaaatgccgaagtcggaacaggtttcaatgctgcaacaggt
gaatgggtgaatatgattgatgcaggaatcatcgacccagttaaagtgagccgttcagcc
cttcaaaacgccgcttctgtagcgagtctgatcttgacgactgaagcagtcgtagctaac
aaaccagaaccagtagccccagcaggaccaggaatggatccaagcatgatgggtgggatg
atgtaa
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