Streptococcus parasanguinis ATCC 15912: HMPREF0833_11890
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Entry
HMPREF0833_11890 CDS
T01545
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0833_11890 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scp03021
]
HMPREF0833_11890 (rpoE)
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_11890 (rpoE)
Transcription machinery [BR:
scp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0833_11890 (rpoE)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0833_11890 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AEH56921
UniProt:
F8DHZ3
LinkDB
All DBs
Position
2012648..2013232
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AA seq
194 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILELRGRDHEMYFSDLVNEIQNYLEKSNSEIREALPLF
YTELNVDGSFIPLGDNKWGLRSWYAIDEVDEEIIALEETDEDETPKKRKKKRVNAFMDGD
EDAIDYNDDDPEDEEVYEADPALSYDEENPDDEKSEVEAYDAEINEIVPDDLGEEVELSE
EDDEEEDAEDEEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctggacaagaaaaaagtgaactttctatgattgaagtggca
cgtgcgattttagaattacgcggacgtgaccatgaaatgtactttagcgatcttgtaaat
gaaattcaaaattaccttgaaaaatcaaacagcgagatccgtgaagctcttccattgttc
tacacagaattgaatgtagatggaagctttatcccacttggagataacaaatggggcctt
cgttcatggtatgccatcgatgaagttgatgaggaaatcatcgctcttgaagaaacagac
gaagacgaaactcctaagaaacggaagaaaaaacgtgtcaatgccttcatggatggagac
gaagatgcaatcgactacaacgatgacgatccagaagacgaagaagtttacgaagcagat
ccagctctttcatatgatgaagaaaatccagatgatgaaaagagtgaagtcgaagcttac
gatgctgaaatcaatgaaatcgtaccagatgatttgggtgaggaagttgaattgagcgaa
gaagacgacgaagaagaggatgctgaagacgaggaagaagaataa
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