Streptococcus parasanguinis ATCC 15912: HMPREF0833_12012
Help
Entry
HMPREF0833_12012 CDS
T01545
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0833_12012 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_12012 (priA)
Enzymes [BR:
scp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0833_12012 (priA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0833_12012 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
PriA_3primeBD
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
SLFN-g3_helicase
DnaB_C
AAA_7
Zn_ribbon_6
PIF1
AAA_19
nSTAND_NTPase5
AAA_30
TrwB_AAD_bind
DUF5839
PBP_like
ADDB_N
CTP-dep_RFKase
T2SSE
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AEH57043
UniProt:
F8DIQ1
LinkDB
All DBs
Position
2139642..2142026
Genome browser
AA seq
794 aa
AA seq
DB search
MIAKVIVDVPLMQTDKPYSYQIPSEFEDMIEAGIRVHVPFGKANRLIQGIVIEVLEVIDT
TEELKAIVEVLDYTPVLNKEQFWLADQLRKSVFSYKITILKTMLPSLLNSSYDKILYPQP
SLDLATKVKLFGKKNEVAFSSLDVADQALVMRLVRKGDLVLEYKAKDKKQIKTEKWYRIN
QERLKELQPSARAKKRLALKEHLLLEQGEQPLAGLYQNFSREVVAYFIDQGVLEITEREV
NRAAAYYEGKEQSQALLLNTEQSKAVETVVSQFGKTSNPFLLEGVTGSGKTEVYLQIIQE
VLNKGKTAIMLVPEISLTPQMTDRFISRFGQEVAILHSGLSNGEKYDQWRKVERGEARVV
VGARSAIFAPLKNIGAIIIDEEHEASYKQDSNPRYHAREVAVLRAQYNQAVLLLGSATPS
LESRARATKGVYELIRLTQRANPAAKIPEVKVVDFRDYIGQNEAGNFTPVLVEAIAEHLQ
KKEQIVLMLNRRGYSSFVMCRECGTVDTCPNCDISLTLHMDTKTMNCHYCGYSKAIPRHC
PNCQSPSIRYYGTGTQKAYDELQEIFPEAKILRMDVDTTRKKGSHAAILDAFGNGEADIL
LGTQMIAKGLDFPNVTLVGVLNADTSLNLPDYRSSERTFQLLTQVAGRAGRAEKEGEVII
QSYNPNHYAIRFAKDQDYEGFFAYEMQIRRQLGYTPYYFTVGLTLSHKSEEIVMEKSHQV
MEILRSGLSDQVQILGPTPKPIARTHNLYHYQIIVKYRFEEGMTQVLNQILEFTQEKGNK
DLRLSIDNEPQSFM
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcaaaagtaatcgtagatgtaccattgatgcagacggataaaccctattcttac
cagattccatcagaatttgaggatatgatagaggcgggaatacgagtccatgtgcccttt
ggtaaagccaatcgattgattcagggaattgtgatcgaagtattagaagttatcgatact
acagaggaattgaaggcgattgtagaagtcttagactacacacctgtcttaaacaaagaa
cagttctggttggcagatcaattgcgaaaaagtgttttttcatataagataacaatttta
aaaaccatgcttccctctctcctcaattccagttacgacaagattttgtatcctcagccg
tcattggatctagcaaccaaagtgaagctttttggtaaaaaaaatgaagtcgctttttct
tctttagatgtagctgatcaagctctggttatgcgcttggttagaaaaggcgatttggta
ttagaatacaaggccaaggataagaaacaaattaaaacagaaaaatggtatcgcattaac
caggaacgattaaaagaacttcaaccttcagcgagagctaaaaaaaggctagcattgaaa
gaacacctgttactagagcaaggggagcaacctttagcaggattgtatcagaatttttca
cgagaagtagtggcttattttattgatcagggtgtgttagaaattactgagcgagaagtg
aatcgggcggctgcttattatgaaggaaaagaacagtcccaagccctgcttttaaataca
gagcagtcaaaagctgtggaaacagttgtttctcagtttggaaaaacatcaaatcctttt
ttattagaaggagtgactggaagtgggaaaacggaagtttatttgcagattattcaggaa
gttctaaataaggggaaaacggctatcatgttggtccctgagatttccctgacaccacag
atgacagaccgttttatctcgcggtttggtcaggaagtagccattctacactcgggctta
tcaaatggtgaaaagtacgatcaatggcggaaagttgaacgtggggaggccagggtagtc
gtgggagcacgctcagcaatctttgctcctttaaaaaacataggagccatcattattgat
gaggagcacgaggcttcctacaaacaagatagtaacccacgctaccacgcaagggaagtc
gcagtcttaagggctcagtacaatcaagcagtcttgcttcttggatctgccacaccaagt
ctagaatcgcgggctcgtgcaacaaaaggggtttatgaattaattcgtctaacccagcgg
gccaatccggcagccaaaattccagaagttaaagttgttgatttccgtgattatattggc
caaaatgaagctggtaacttcactcctgttctagtggaagctattgctgaacacttgcag
aaaaaagagcagattgtcttgatgttgaaccgccgtggttattccagctttgttatgtgt
cgcgagtgtgggactgtggatacttgtcctaattgtgacatctctttgaccctccatatg
gataccaaaactatgaattgccattattgtggttatagtaaggcaattcctcgacactgt
ccaaattgccaaagtccttccattcgttattacggaacaggaacgcaaaaagcctatgat
gaattacaagagatctttcctgaggctaaaattttgcgcatggatgtggataccacccga
aaaaaagggagccacgcagcaatattagatgctttcgggaatggagaagcggatattttg
ttagggacgcaaatgattgctaaggggctggattttccaaatgtgacgttagtgggtgtc
ttgaatgcggatacttctttaaatttaccggattatcgatcctcagagcgaacctttcag
cttttgactcaggtggcaggaagggccggacgagcagagaaagaaggagaagtcatcatt
cagagctacaaccccaatcattatgcaatccggtttgctaaagaccaagattatgaaggc
ttttttgcctatgaaatgcagattcgccggcagttgggctatacaccgtattacttcaca
gttgggttaaccctgtcgcataagagtgaggaaattgtgatggagaagtcacatcaggtt
atggaaatcctccgttctggcttatccgatcaggtccaaatcttaggaccaactcctaaa
ccaattgcacgtacacataatttgtatcattatcaaattattgtgaagtatcgtttcgaa
gaaggtatgacacaggtattgaatcaaatcttagaatttacccaagaaaaagggaataaa
gatctgcgtctgagtattgataatgaacctcaaagtttcatgtaa
DBGET
integrated database retrieval system
