Spiroplasma culicicola: SCULI_v1c01130
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Entry
SCULI_v1c01130 CDS
T03047
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scq
Spiroplasma culicicola
Pathway
scq03420
Nucleotide excision repair
scq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCULI_v1c01130 (pcrA)
03430 Mismatch repair
SCULI_v1c01130 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scq03400
]
SCULI_v1c01130 (pcrA)
Enzymes [BR:
scq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCULI_v1c01130 (pcrA)
DNA repair and recombination proteins [BR:
scq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCULI_v1c01130 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SCULI_v1c01130 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_12
AAA_30
DEAD
SRP54
ABhydrolase-like_N
Motif
Other DBs
NCBI-ProteinID:
AHI52454
UniProt:
W6AFI9
LinkDB
All DBs
Position
120698..122869
Genome browser
AA seq
723 aa
AA seq
DB search
MNELLKSLNDPQLDSVITTDVPLRIIAGAGSGKTRVITTKIAYLIEKENLNPYKILAVTF
TNKAANEMKERVRKITQDNFRTPYIMTFHSFCVRVLREDFEYVGLPKEFTIIDTSDQTKI
VRKILKDLDMNDSKSKPEKKILAKISNWKSSFTTWQEAYDESLNHLYKSYAKVYRKYNEF
LEEKGYVDFDDLILKVHTLFKTNIEIRSKWANRFDYILVDEFQDTNYTQFDLIKWLTSGR
NCLTVVGDPDQTIYSWRGAKVNIILNFEKEFKNARTVMLKQNYRSTKPILDLANDLIDNN
KNREKKDIFTEKHEGEKVSIKEANSKNFEAKYVSKKIKELVESKQYNYSDIFVLYRTNAW
SFEFEKEFANNKVPFQMVGGFQFRDRKVIKDTTALLRAIVVKDDLSFDRIFGFIPKVGAV
TSEKLFNLAHENNLNMFDLLVNHLDLVKTITKNLNDLSYALSYAAKMFEENKNLIDICQT
LIKTTGYQDRLDLKDKEDVESLQNLEAYYDQMKQFDLDYDSEPQTLKRLVKFLQEESLGD
AEQEIQVPNKVTLLTIHAAKGLENKIVFITGVNKDVFPSRMSFSSIESLEEERRAFYVAI
TRAQELLYISYVSGEYSYISGGSLSPSKFIGELDPNLYEIEKNIFFHSPTEMSSQKYDSG
VIHTKPEKLDAGVKVGDAIEHMMFGEGIVTKVLDKFISVSFKKAAYGTKTLPINTTAWTK
KDY
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattattaaagagtttgaatgatcctcaattagacagtgtaattacaactgat
gttcctttaagaataattgctggagctggtagtggtaaaacaagagttattactactaaa
attgcatatttaattgaaaaagaaaatttaaatccatataaaatattggcagttacattt
acaaataaagctgccaatgaaatgaaagaacgagtaagaaaaattactcaagataatttt
agaacaccttatatcatgaccttccactcattttgtgtaagagtattaagagaagatttt
gaatatgtgggacttccaaaagaatttacaattattgatacaagtgatcaaacaaaaatt
gtgagaaaaatattaaaagatttagacatgaatgattctaaatcaaaaccagaaaaaaag
attttagcaaaaattagtaattgaaaatcaagttttacaacttgacaagaagcatatgat
gaaagtttaaatcatttgtataaaagttatgcaaaggtttatcgcaagtataacgagttt
ttagaagaaaaaggttatgttgattttgatgatttaattttaaaagtgcatactttattt
aaaacaaatattgaaattagaagtaaatgagcaaatcgctttgattatattttagtggat
gagtttcaagatacaaactatactcaatttgatttaattaagtgattaacatctggaaga
aattgtttaacagtggtaggagatcctgaccaaacaatttattcttgaagaggtgctaaa
gttaatattattttaaactttgaaaaagaatttaaaaatgcaagaactgtcatgttaaaa
caaaattatcgttcaacaaaaccaatcttagatttagcaaatgatttaattgataataat
aagaatcgagaaaaaaaagatattttcacagaaaaacatgaaggtgaaaaagtatcaatt
aaagaagcaaattcaaaaaactttgaagcaaaatatgtttcaaaaaaaattaaagaactt
gttgagtcaaaacaatataactattcagatatatttgttttatacagaacaaatgcttga
tcatttgaatttgaaaaggaatttgcaaataataaagttccgtttcaaatggttggggga
tttcaatttagagatagaaaagtaattaaagatacaacagcgttattaagagcaattgtt
gttaaagatgatttatcatttgatcgtatatttggctttattcctaaagttggagctgtt
actagtgaaaaattatttaatttagcacatgaaaataatttaaatatgtttgatttgtta
gtaaatcatttagatttagtaaaaacaattactaaaaacttaaatgacttaagttatgct
ttaagttatgctgcaaaaatgtttgaagaaaataaaaacctaattgatatttgtcaaact
ttaatcaagacaacaggttatcaagatcgattagatttaaaagataaagaagatgttgaa
tctttgcaaaacttagaagcatattatgatcaaatgaaacaatttgatttggattatgat
agtgaacctcaaactttaaaacgtttagtaaaatttttacaagaagaatcacttggtgat
gcagaacaagaaattcaagttccaaacaaagtaacattattaacaattcatgctgctaaa
ggacttgaaaataaaatagtttttattacaggtgtaaataaagatgtctttccttcaagg
atgagttttagttcaattgaatcattagaagaagaaagacgtgctttttatgttgcaatt
acaagagcacaagaattgctatatatttcgtatgtttcaggagaatattcatatatatct
gggggaagtttaagtccttctaaatttattggagagcttgatccaaatttatatgaaatt
gaaaaaaatatctttttccattctccaacagaaatgtcaagtcaaaaatatgattcagga
gtcattcatactaaaccagaaaaattagatgctggagttaaagttggtgacgctattgaa
catatgatgtttggagagggaattgttaccaaagtattagataaatttatttcagtaagt
tttaaaaaagctgcatatggtacaaaaactttacctattaatacaacagcttgaaccaaa
aaagattattaa
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