Spiroplasma culicicola: SCULI_v1c04130
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Entry
SCULI_v1c04130 CDS
T03047
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scq
Spiroplasma culicicola
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scq03016
]
SCULI_v1c04130 (truB)
Enzymes [BR:
scq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCULI_v1c04130 (truB)
Transfer RNA biogenesis [BR:
scq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCULI_v1c04130 (truB)
Prokaryotic type
SCULI_v1c04130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
AP3B1_C_2
Relaxase_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHI52754
UniProt:
W6AGF5
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All DBs
Position
453101..454018
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AA seq
305 aa
AA seq
DB search
MDIKQSGIFLVNKPQGITSHDLIQKIKRKLNIKKIGHAGTLDPLATGLMVVLVNQATKIS
NYLLSSDKSYEVEMKLFVKTDTGDITGEVIETQDEHKISRKEIEQVIAKYNGYMYEQYPP
IYSAVKVNGKKLYEYARIHQEEQVEIKPRTVTINTCSLLDFNPKANTIRLQVNCSKGTYI
RSLVQDIAQEFDAICTVSALHRNMSGKFDVAQAKEWNQVQESDLISMYNGLLQNDHNLIE
YHKVKDIIQGRAINLTGKNIPIVFLIDDKKNVLAIYKWVAHDLYTCQRGLWDESVLNLTE
AEREF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacattaaacaatctggaatatttttagttaataaaccccaaggaattacaagtcac
gatttaattcaaaagattaaacgtaaattaaatatcaaaaagattggtcatgctggaact
ttagatcctttagcgacaggtttaatggttgtcttggtcaatcaagcaaccaagatttca
aattacttattaagtagtgataaaagttatgaagttgaaatgaagttatttgtcaaaaca
gatacaggtgacattactggagaagtaattgaaactcaagacgaacataagatttcaaga
aaagaaattgaacaagtaattgcaaaatataatggttacatgtatgaacaatatccccca
atttattcagctgttaaagttaatggcaaaaaattatatgaatatgcaagaattcatcaa
gaagaacaagttgaaattaagccaagaactgtaactattaatacttgtagtttgctagat
tttaatccaaaagccaatactattcgtttacaagtaaattgtagtaaaggaacttatatt
cgcagtcttgttcaagatattgctcaagaatttgatgccatttgtacagtgtcagctctt
catcgcaatatgtcaggaaaatttgatgttgctcaagcaaaagaatgaaatcaagtccaa
gaaagtgatttaatctcaatgtataacggattattacaaaatgatcacaatttaattgaa
tatcacaaagtaaaagatataatacaaggtagagccataaacttaacaggaaaaaatatt
ccaattgtttttttaattgatgacaaaaagaatgttttggcaatttataaatgagtagct
cacgatttatatacatgtcaacgaggtttatgagatgaaagtgttttaaacttaacagaa
gcagaaagagagttttag
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