Spiroplasma culicicola: SCULI_v1c04610
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Entry
SCULI_v1c04610 CDS
T03047
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scq
Spiroplasma culicicola
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scq03019
]
SCULI_v1c04610
03009 Ribosome biogenesis [BR:
scq03009
]
SCULI_v1c04610
Enzymes [BR:
scq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCULI_v1c04610
Messenger RNA biogenesis [BR:
scq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCULI_v1c04610
Ribosome biogenesis [BR:
scq03009
]
Prokaryotic type
rRNA helicases
SCULI_v1c04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_7
AAA_19
LicP_NPro
Cas3-like_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AHI52802
UniProt:
W6A737
LinkDB
All DBs
Position
507728..509089
Genome browser
AA seq
453 aa
AA seq
DB search
MKFSDFGFKKFLNDALDKIGFSKPTGIQQKVIPLLKKHKSVIAQSHTGTGKTHAFLLPIL
NNLDYSSNKVQCLIITPTRELARQIYANIKELLAFNPEATSAIYVGGDDVEKHQDGLKNK
QPMIVVGTPTRLRGLYDTNYLQLTTTNYVVIDECDMIFDLGFIDDVDFMISKINKQANIS
LFSATINNAIKPFLTKYLSGSVFIENMADKPSNKNIEHILVWTKNRQNKELINLIIRKIN
PYVAMIFVNRKDQIKEIIGWLNEAGIKNVGELHGDLDPRQRTNMQKRIQNMEFKWIVASD
VAARGIDIDGVSHIISIDLPRELDYYIHRSGRTGRNNYTGQSYVLFNSTNQHQIDELKSM
GIEFSNKKLANNDLVDINPKVKKKIIDPNNPVAVEEQKIISKYKKQPVKPGYKKKRKAEI
DKLKKDVRRKHIKESIAKIKKEKYKKRREELFD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgattttggatttaaaaagtttttaaatgatgcattagataaaattggt
ttttcaaaaccaacaggaattcaacaaaaagttattcccttattaaaaaaacacaaatca
gtaattgctcaatctcatactggaactggaaaaactcatgcctttttattaccaatttta
aataatttagattattcaagtaataaagttcaatgtttaataatcacaccaacaagagaa
ttggcacgtcaaatttatgccaatattaaagaacttttagcatttaatccagaggctaca
agtgcaatttatgttggaggagatgatgttgaaaaacatcaagatggtttaaaaaataaa
caaccaatgattgttgtaggaacaccaacaagattaagaggtttatatgataccaattat
ttacaattaacaacgaccaattatgttgtaattgatgaatgtgacatgatttttgattta
ggttttattgatgatgtagactttatgatttcaaaaattaataaacaagcaaatatctct
ttattttctgccacaattaataatgctattaaaccttttctaacaaaatatttatctgga
agtgtctttattgaaaatatggccgataaaccaagtaataaaaatattgaacatatttta
gtatggacaaaaaatcgtcaaaataaagaacttattaatttaattattagaaaaataaat
ccatatgttgctatgatttttgttaatagaaaagatcaaattaaagaaataattggttga
ttaaatgaagctggtattaaaaatgttggtgaattgcatggagatttagatccaagacaa
agaacaaacatgcaaaaaagaattcaaaatatggaattcaaatgaattgttgccagtgat
gttgctgcaagaggaattgatattgatggagtaagtcatattatttcaattgatttacca
cgagaattggactattacattcacagaagtggacgaactggaagaaataattatactggg
caaagttatgtcttatttaattcaacaaatcaacatcaaattgatgaattaaaatcaatg
ggaattgagttttcaaataaaaagttagccaataatgatttggtagatattaatccaaaa
gttaagaaaaaaattattgatcccaataatcctgttgctgtagaagaacaaaaaataatt
agtaaatataaaaaacaacctgtaaaaccaggatataaaaagaaaagaaaagcagaaatt
gataagcttaaaaaagatgttagaagaaaacatattaaagaatcaattgcaaaaattaaa
aaagaaaaatataaaaaacgtagagaagaactatttgattaa
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