Spiroplasma culicicola: SCULI_v1c05670
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Entry
SCULI_v1c05670 CDS
T03047
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
scq
Spiroplasma culicicola
Pathway
scq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCULI_v1c05670 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scq03400
]
SCULI_v1c05670 (xseA)
Enzymes [BR:
scq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SCULI_v1c05670 (xseA)
DNA repair and recombination proteins [BR:
scq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SCULI_v1c05670 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Apolipoprotein
Baculo_PEP_C
HisK-N-like
Phasin_PhaP
DUF5344
Motif
Other DBs
NCBI-ProteinID:
AHI52908
UniProt:
W6A6Z4
LinkDB
All DBs
Position
627394..628668
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AA seq
424 aa
AA seq
DB search
MDAVILSISDLSDNLKYHLESSNAFKNINIKGEISNLTYNKSGHIYFSLKDADSKVDCAI
WKSNAQKFTDLNPSEGTEIIATGTISFYKPSGKITFTVVDVKIDGIGALAELYTKRFKEY
EAKGWFAQEFKKSIKKIPLNIGIITAATGDAVRDLITTMKRRFPIVNIFLFPTLVQGDGA
AKDISKKIKQANDFSPQLDTLIVGRGGGSYEDLWAFNEIEVIEAIKNSDIPIISGVGHEP
DITLTDHVADLRASTPTAAGEAATPDVNVLINSLNSTHQNFANILLTKINNIKTNFNNIT
TNLHTAVKNKIDKEQNNLNSTIESFRSSFTNKIRNIKINLINFQDYFAKSLKTKLEIIKQ
ELEKQVELINLLDPTRPLLKGFALIMQDKKTLKSVNDIDSSKPMSAKLIDGTLKLSIDEI
IRED
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtaattttgagtataagtgatttgagtgataatttaaaatatcatcttgaa
tcatcaaatgcttttaaaaatataaatataaaaggtgaaatctcaaatttaacttacaat
aaatctgggcacatttatttttcacttaaagatgctgacagtaaagttgattgtgctatt
tgaaaatcaaatgcacaaaaatttactgatttaaatccaagtgaaggaacagaaattatt
gcaacagggacaatttcattttataaaccctcaggaaaaattacttttacagtagttgat
gtcaagattgatggaattggtgctcttgcagaattatataccaaacgttttaaagaatat
gaagctaagggttgatttgcacaagaatttaaaaagtcaattaaaaaaatacctttaaat
attggaattataactgctgcaacaggagatgcagttagagatttaattacaacaatgaaa
agacgttttccaattgtaaatatctttttatttccaaccttagtgcaaggagatggagct
gcaaaagatatttccaaaaaaattaaacaagcaaatgatttttcacctcaacttgatact
ttaattgtaggaagaggtgggggaagttatgaagatctatgagcatttaatgaaattgaa
gttattgaagcaattaaaaattcagacattccaattatttcaggagttggacatgaacca
gatattactcttacagatcatgttgcagatttaagagcaagtaccccaacagctgcagga
gaagctgcaactcctgatgtaaatgttttaatcaatagtttaaacagtactcatcaaaac
tttgcaaatatcttgttaacaaagattaacaatattaaaaccaactttaataatataact
accaatttgcatactgcagttaaaaataaaatagataaagaacaaaataatttaaattca
acaattgagagctttagaagttcttttacaaataaaattagaaatatcaaaattaattta
attaattttcaagattattttgcaaagagtttaaaaactaaattagaaataattaaacaa
gaattagaaaaacaagttgagttaataaatttattagacccaacaagacccttactaaaa
ggatttgcattaattatgcaagataaaaaaacattaaaatcagttaatgatattgattct
tccaaaccaatgagtgccaaattaattgatggtactttaaagttaagcattgatgaaatc
attagagaggactaa
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