Spiroplasma culicicola: SCULI_v1c08140
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Entry
SCULI_v1c08140 CDS
T03047
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scq
Spiroplasma culicicola
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scq03019
]
SCULI_v1c08140 (yhaM)
Messenger RNA biogenesis [BR:
scq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCULI_v1c08140 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AHI53154
UniProt:
W6AHG9
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All DBs
Position
complement(902184..903149)
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AA seq
321 aa
AA seq
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MKIFEINSEIKSLELVARVERVILSTGNNGSNYLIVNLVDKTGRIEARLWNADEKDVQTI
KVDSLIKIDANVNLYRQQLQLKINHYQIIEEKDYSTFGILAEEFAISAPIDVDKIYDELI
TLIDGLQNGVYQKITKTILQKYEEEFKTYPAATSIHHNLIGGLIWHSYSLVKGAMGLKEV
YNYADIDWELIYCGATLHDIGKVIEMKGKTATEYTDEGKLLGHISIGNTFIASLIEQLKL
NEEQRNEAVKLQHIILSSHGKNEFGSPIEPIMIEGVIVSSLDALDARIYKINDELSKVKG
EGWTSKIFTEEGKSFLKHFNK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttgaaataaatagtgaaatcaaatctttagaacttgttgctcgtgttgaa
agagtcattttatcaacaggtaataatggttcaaattatttaattgtcaatttagtggat
aaaaccggaagaatcgaagcaagattatgaaatgcagatgaaaaggatgtacaaacaatt
aaagtggatagtctcattaaaattgatgcaaacgttaatttatatcgccaacaattgcaa
ttaaaaattaatcactatcaaataatagaagaaaaagattactctacatttggaatttta
gcagaagagtttgcaataagtgctccaattgatgttgataaaatttatgatgaattgata
actttaattgatggtttacaaaatggagtttatcaaaaaattacaaaaacaatcttgcaa
aaatatgaagaagaatttaaaacttatccagctgcaacttcaattcaccataacttaatt
gggggattaatttgacatagttattctcttgtaaaaggagcaatgggtttaaaagaagtt
tacaattatgcagatattgattgagaattgatctattgtggagctacattacatgatatt
ggaaaagtaattgaaatgaagggtaaaactgcaacagaatatactgatgaaggtaaacta
ttgggtcacatttcaattggaaatacttttattgcaagcttaattgagcaattaaaatta
aatgaagaacaaagaaatgaagctgttaaattacaacatattattttatcaagtcatggt
aaaaatgaatttggttcaccaattgaaccaattatgatcgaaggagtaattgtctcttca
ttagatgcacttgatgcacgaatttataaaatcaatgatgaattatctaaagtaaagggt
gaagggtgaacttcaaaaatctttacagaagagggtaaaagctttttaaaacattttaat
aaataa
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