Spiroplasma culicicola: SCULI_v1c09890
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Entry
SCULI_v1c09890 CDS
T03047
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scq
Spiroplasma culicicola
Pathway
scq00010
Glycolysis / Gluconeogenesis
scq00020
Citrate cycle (TCA cycle)
scq00260
Glycine, serine and threonine metabolism
scq00280
Valine, leucine and isoleucine degradation
scq00380
Tryptophan metabolism
scq00620
Pyruvate metabolism
scq00630
Glyoxylate and dicarboxylate metabolism
scq00640
Propanoate metabolism
scq00785
Lipoic acid metabolism
scq01100
Metabolic pathways
scq01110
Biosynthesis of secondary metabolites
scq01120
Microbial metabolism in diverse environments
scq01200
Carbon metabolism
scq01210
2-Oxocarboxylic acid metabolism
scq01240
Biosynthesis of cofactors
Module
scq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
scq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SCULI_v1c09890 (pdhD)
00020 Citrate cycle (TCA cycle)
SCULI_v1c09890 (pdhD)
00620 Pyruvate metabolism
SCULI_v1c09890 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SCULI_v1c09890 (pdhD)
00640 Propanoate metabolism
SCULI_v1c09890 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCULI_v1c09890 (pdhD)
00280 Valine, leucine and isoleucine degradation
SCULI_v1c09890 (pdhD)
00310 Lysine degradation
SCULI_v1c09890 (pdhD)
00380 Tryptophan metabolism
SCULI_v1c09890 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SCULI_v1c09890 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scq04147
]
SCULI_v1c09890 (pdhD)
Enzymes [BR:
scq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SCULI_v1c09890 (pdhD)
Exosome [BR:
scq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SCULI_v1c09890 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Pyr_redox_3
GIDA
Biotin_lipoyl_2
AlaDh_PNT_C
NQRA
GCV_H
FAD_binding_2
FAD_oxidored
RnfC_N
HlyD_D23
HlyD_3
NAD_binding_8
HI0933_like
PTS_EIIA_1
DUF6799
3HCDH_N
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AHI53329
UniProt:
W6AI04
LinkDB
All DBs
Position
complement(1086459..1088339)
Genome browser
AA seq
626 aa
AA seq
DB search
MFKVKFADIGEGLTEGTVTEIIAKVGDTVKMGDPLFNVETDKVTSDIYAPVDGTVAKILI
TSGQEIKVGEVVVEIDDGKGDAPSEAKAEPVEENASVVGATPVSNDLLKRGRTRAVPPKK
TSTFDQVSAAISNPNPAGITRGNGSALKPAPKFTPKNPENHYEVIMIGAGVGGYVGAIKC
AQLGLKTMIVEKANYGGVCLNIGCIPTKTLLKSADLYEQITKHADKYGIKVDQAGVKADW
KAIQARKEDVVNKLTTGVKGLMKKNKITTVEGEAKAIDKNTIEVNGVQYTCDNLIIATGS
VPNHMTLPGAKEAIESGWLIDSTGALALPKIPKSLVIIGGGVIGVEFACVYKRLGTKVTI
LQFLPTILEMLDSDISKEMTKELLNRGNLEIITEASTKEFKDGTVIYEKDGKTHTIKADY
CLQSVGRKTVTTGFENIGVNFNERGHINVNEYCETNIDGVYAIGDVTGKMMLAHVASHQG
IITANRIARRAGKEHAEDMVMNFDRVPSCIYTHPEVASVGKTEDQLKAEGVEYKAYKFPF
AAIGKALADGNTVGFVKLICEPKYKQVLGAHIISNTATDMISEITTVMESEATISEIARA
IHPHPTLSEAIGEAAEALESGKPINF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtaaaatttgcagatatcggagaaggattaactgaaggaacagttacagaa
attattgccaaagttggagatactgttaaaatgggagatccattatttaacgttgaaact
gacaaagtaacatcagacatttatgcaccagtggatggaactgttgcaaaaattttaata
acatcaggtcaagaaattaaagttggagaagttgttgttgaaattgatgatggaaaagga
gatgctccaagtgaagctaaagctgaaccagttgaagaaaatgcttcagtagttggtgca
actcctgtatcaaacgatttattaaaaagaggaagaacaagagctgttccacctaaaaaa
acatcaacatttgatcaagtatcagctgcaattagcaatccaaacccagcaggaattact
cgtggaaatggatctgctttaaaaccagctccaaaatttacaccaaaaaatccagaaaac
cattatgaagtaattatgattggtgctggagttgggggttatgtaggtgctattaaatgt
gctcaacttggtttaaaaactatgattgttgaaaaagccaattatgggggagtatgtcta
aacattggatgtattcctacaaaaactttattaaaatcagctgatttatatgaacaaatt
acaaaacatgctgacaaatatggtattaaagttgatcaagctggagttaaagctgattga
aaagcaatccaagctagaaaagaagatgttgtcaataaactaacaactggagttaaaggt
ttaatgaaaaaaaacaaaattactacagttgaaggtgaagcaaaagcaattgacaaaaat
acaattgaagttaatggagtgcaatacacttgtgataacttaataattgcaacaggaagt
gttccaaatcatatgactcttccaggagcaaaagaagcaattgaatctggttgactaatt
gattcaactggagcattagcattaccaaaaattccaaaaagcttagtaattattggggga
ggagtaattggagttgaatttgcttgtgtctataaacgtttaggtacaaaagtaacaatt
cttcaattcttgccaacaatcttagaaatgttagatagtgacatttcaaaagaaatgaca
aaagaattattaaacagaggaaacttggaaattattacagaagcatcaacaaaagaattt
aaagatggaactgtaatttatgaaaaagacggaaaaactcacacaattaaagcagattat
tgtttacaatctgttggaagaaaaactgtaacaacaggatttgaaaacattggtgtaaac
tttaatgaaagaggacatattaatgtcaatgaatattgtgaaactaatattgatggagtt
tatgcaattggagatgtaacaggaaaaatgatgttagcgcacgttgcttcacatcaagga
attattactgcaaatagaattgcaagaagagctggaaaagaacatgccgaagatatggta
atgaactttgatcgtgttccaagttgtatttatacacacccagaagtggcttcagttgga
aaaactgaagaccaactaaaagctgaaggggttgaatacaaagcatataaattcccattt
gcagctattggaaaagcattagctgatggaaatactgttggttttgtaaaactaatttgt
gaaccaaagtataaacaagttttaggagcacatattatttcaaatactgcaacagatatg
atttctgaaatcacaacagttatggaatcagaagcaacaatttcagagattgcaagagca
attcaccctcacccaacattgagtgaagcaattggtgaagcagcagaagctttagaatct
ggaaaaccaattaacttttaa
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